Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00538 ATGGGCCAGTGCTACGGCAAGAACAATCTCAGGCCCCAAAATGAcgacgccgccgatgactctgccgtcgcagtcgccggatccgccgatgtcccgccctctccgctgccgccCAAGGACACGCCGGCGCGGGCCAACCCCTGGCCGAGTCCCTTTCCTCACGGCGGAGGCACGGTGACGCCGTCGCCGGCAAGGAGCACGCCGAGGAGGTTTTTCCGGCGGCCGTTCCCGCCGCCGTCGCCTGCGAAGCACATAAGGGCGTCGCTGGCGAAGCGGCTGGGGCACGCGAAGGCGCCCAAGGAGGGGCCGATCCcggaggaggaggcggcggcggccgcgacggAGCAGTCGCTGGATAAGAGCTTTGGGTATGGGAAGAATTTTGGGGCAAAATTTGAAATTGGGAAAGAAGTGGGGCGAGGGCATTTCGGTCATACCTGCTGTGCTAAGGGGAAGAAGGGTGACCTCAAAGACCAACCTGTTGCAGTTAAGATCATTTCCAAGGCTAAGATGACCACTGCAATAGCAATTGAAGATGTTCGCAGGGAGGTGAAGATATTAAAAGCTCTATCTGGTCATAAACATCTCGTCAAATTTCATGATGCTTTTGAGGATGCCAACAATGTGTACATAGTTATGGAATTGTGTGAAGGTGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAGTATTCGGAGGAGGATGCCAAGGTTATAGTTTTACAGATCCTAAGTGTGGTTGCTTTTTGTCATCTTCAAGGTGTTGTGCACCGGGATTTGAAACCTGAGAATTTCCTTTTCACTTCAAGAAGTGAAGATGCTGACATGAGGCTTATTGATTTTGGTCTTTCCGACTTCATCCGACCAGATGAACGGTTGAATGACATTGTTGGGAGTGCCTATTACGTGGCACCTGAGGTCCTTCACAGGTCGTATAGTCTGGAAGCAGATATCTGGAGTATTGGTGTTATTACCTATATCTTGCTATGCGGAAGTCGACCTTTCTGGGCACGAACAGAATCTGGAATTTTTCGTGCAGTGCTTAGAGCTGACCCTAACTTCGATGATTTGCCGTGGCCTACTGCCTCTGCAGAGGCCAAGGACTTCGTAAAACGACTCCTAAACAAGGACTACAGGAAAAGAATGACAGCTGTCCAAGCTCTAACTCATCCTTGGTTGAGGGATGACAGCCGCCCGATCCCTTTAGATATCTTAGTTTATAAACTAGTGAAGGCTTATCTTCATGCAACTCCATTCAAACGTGCAGCAGTGAAGGCCCTTTCAAAAGCCTTGCCAGAGGATGAATTGCCCTACCTTAGGGCACAATTCAGATTGTTGGAACCAAATAGAGACGGGCACATCTCCCTTGATAATTTCAAAATGGCTCTTGTACGCCATGCAACTGATGCCATGAGGGAGTCAAGGGTTCTTGATATTGTAAATGCGATGGAGCCACTTGCCTACAGAAAGATGGACTTTGAAGAATTTTGTGCAGCTGCAATTAGCACATATCAATTGGAGGCACATGATAGGTGGGAAGATATTGCATCAACTGCTTTTGAACATTTTGAGAGTGAAGGAAATCGACCGATAGCGGTTGAAGAATTAGCCAGAGAGTTGAATCTTGGGCCTTCATCTTATTCAGTTCTCAAAGATTGGATCCGAAATACTGATGGAAAGCTTAGTTTACTTGGATATACAAAATTTTTGCATGGTGTGACTCTCCGTAGTTCAAACCCAAGAAACCGGTAG 1755 0.4484 MGQCYGKNNLRPQNDDAADDSAVAVAGSADVPPSPLPPKDTPARANPWPSPFPHGGGTVTPSPARSTPRRFFRRPFPPPSPAKHIRASLAKRLGHAKAPKEGPIPEEEAAAAATEQSLDKSFGYGKNFGAKFEIGKEVGRGHFGHTCCAKGKKGDLKDQPVAVKIISKAKMTTAIAIEDVRREVKILKALSGHKHLVKFHDAFEDANNVYIVMELCEGGELLDRILSRGGKYSEEDAKVIVLQILSVVAFCHLQGVVHRDLKPENFLFTSRSEDADMRLIDFGLSDFIRPDERLNDIVGSAYYVAPEVLHRSYSLEADIWSIGVITYILLCGSRPFWARTESGIFRAVLRADPNFDDLPWPTASAEAKDFVKRLLNKDYRKRMTAVQALTHPWLRDDSRPIPLDILVYKLVKAYLHATPFKRAAVKALSKALPEDELPYLRAQFRLLEPNRDGHISLDNFKMALVRHATDAMRESRVLDIVNAMEPLAYRKMDFEEFCAAAISTYQLEAHDRWEDIASTAFEHFESEGNRPIAVEELARELNLGPSSYSVLKDWIRNTDGKLSLLGYTKFLHGVTLRSSNPRNR 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00538 584 Gene3D Transferase(Phosphotransferase) domain 1 125 405 - -
Cca11g00538 584 ProSiteProfiles Protein kinase domain profile. 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00538 584 MobiDBLite consensus disorder prediction 31 49 - -
Cca11g00538 584 SUPERFAMILY EF-hand 420 573 IPR011992 -
Cca11g00538 584 Gene3D - 418 563 - -
Cca11g00538 584 ProSitePatterns Protein kinases ATP-binding region signature. 138 164 IPR017441 GO:0005524
Cca11g00538 584 PANTHER CDPK-RELATED KINASE 3 53 577 - -
Cca11g00538 584 SUPERFAMILY Protein kinase-like (PK-like) 124 413 IPR011009 -
Cca11g00538 584 SMART serkin_6 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00538 584 Gene3D - 412 502 - -
Cca11g00538 584 CDD STKc_CAMK 131 393 - -
Cca11g00538 584 MobiDBLite consensus disorder prediction 1 114 - -
Cca11g00538 584 Pfam Protein kinase domain 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00538 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 256 268 IPR008271 GO:0004672|GO:0006468
Cca11g00538 584 ProSiteProfiles EF-hand calcium-binding domain profile. 435 470 IPR002048 GO:0005509
Cca11g00538 584 PANTHER SERINE/THREONINE-PROTEIN KINASE 53 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00538 Cca-Chr11 8080025 8088188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00538 47 578 EF-hand Containing Proteins AT3G50530 63.240 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Cca11g00538 Pkinase 7.8e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00538 - - gmx:100796256 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00538 11 8080025 8088188 Cca11g00538 11 8080025 8088188 ECH