Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00533 ATGAGCGCCAAGAAGCCGGTCAGACCTCGTACCCGCGTCGGAAGGTACGAGCTCGGAAAAACCATTGGCGAGGGAAGCTTCGCTAGGGTCAAGTTCGCAAGGAACGTTGAGAACGATAGCCATGTCGCCATCAAAATCCTCGACCGAAATCACGTCCTCAAACACAAGATGATGGAACAGTTGCAGAAGGAAATTTCAGCGATGAAGATGATCAATCACCCGAACGTTATCAAAATCTACGAGGTCATGGCAAGCAAAACAAAGATTTACATTGTCTTAGAGTTGGTTAATGGAGGAGAACTATTTGACAAAATAGCTACAAACGGGAGACTTAAAGAGGATGAAGCAAGAAGTTATTTCCATCAACTAATCAATGCAGTTGATTACTGCCATAGTAGAGGCGTGTATCACAGAGATTTGAAGCCAGAGAATCTTCTTCTCGACTCAAATGGTATTCTAAAAGTTTCAGATTTTGGACTCAGTACGTACGCACACCAGGAGGATGAACTCCTCCGCACTGCTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTGCTTAATGATAGAGGTTATGTTGGTTCTGCATCTGATATTTGGTCTTGTGGAGTCATTCTTTTTGTGCTTATGGCTGGCTACTTGCCCTTTGATGAGCCAAATCATGCTGCATTGTACAAAAAAATTGGCAGGGCCCAATTTGCATGTCCATCATGGTTTTCCCCCGAGGCAAAGAAACTATTGAAGCGTATTCTTGACCCAAACCCTTTAACAAGGATAAAAATTCCTGAACTCTTACAAGATGAATGGTTCAGAAAAGGTTACAAACCAGCATCTTTTACAGAGGAAGAGGATATCAATGTAGATGATGTTACTGCTGCTTTCAATGATTCTAAGGAAAAACTGGTGACAGAGAGAAAAGAGAAACCTGTGTCAATGAATGCTTTTGAGCTTATATCTAGGTCACAAAGTTTCAATCTTGAAAATTTGTTTGAGCAGCAGACAGGAATTGTTAAGAAAGAAACACATTTTACGTCACAGTGCCCTGCAAATGAAATTATGTCAAAAATTGAGGAAGCTGCCAAGCCTCTTGGATTTAATGTTCACAAGCGAAATTATAAGATGAAGTTGCAAGGTGATAAGAGCGGAAGGAAGGGTCACCTTTCAGTGGCTACAGAGGTTTTTGAAGTGGCTCCTTCCTTGCACATGGTAGAGCTGCGAAAGACCGGGGGTGACACACTAGAGTTTCACAAGGCATGTGAACATTTTAATTGTGATTGTGGTTTTAGGGAACAAGAAAATAAATCTCTTCATTTTGATCTTCTTTTCTGTTAA 1329 0.4138 MSAKKPVRPRTRVGRYELGKTIGEGSFARVKFARNVENDSHVAIKILDRNHVLKHKMMEQLQKEISAMKMINHPNVIKIYEVMASKTKIYIVLELVNGGELFDKIATNGRLKEDEARSYFHQLINAVDYCHSRGVYHRDLKPENLLLDSNGILKVSDFGLSTYAHQEDELLRTACGTPNYVAPEVLNDRGYVGSASDIWSCGVILFVLMAGYLPFDEPNHAALYKKIGRAQFACPSWFSPEAKKLLKRILDPNPLTRIKIPELLQDEWFRKGYKPASFTEEEDINVDDVTAAFNDSKEKLVTERKEKPVSMNAFELISRSQSFNLENLFEQQTGIVKKETHFTSQCPANEIMSKIEEAAKPLGFNVHKRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKACEHFNCDCGFREQENKSLHFDLLFC 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00533 442 CDD CIPK_C 312 419 - -
Cca11g00533 442 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Cca11g00533 442 SUPERFAMILY Protein kinase-like (PK-like) 13 314 IPR011009 -
Cca11g00533 442 Pfam NAF domain 308 368 IPR004041 GO:0007165
Cca11g00533 442 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Cca11g00533 442 PANTHER - 10 417 - -
Cca11g00533 442 Gene3D Kinase associated domain 1, KA1 305 425 - -
Cca11g00533 442 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 10 417 - -
Cca11g00533 442 Gene3D Transferase(Phosphotransferase) domain 1 96 297 - -
Cca11g00533 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Cca11g00533 442 ProSiteProfiles Protein kinase domain profile. 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00533 442 SMART serkin_6 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00533 442 Pfam Protein kinase domain 16 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00533 442 Gene3D Phosphorylase Kinase; domain 1 7 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00533 Cca-Chr11 7897786 7905834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00533 10 429 CBL-interacting serine-threonine protein kinases AT1G01140 73.647 0.0 660
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Cca11g00533 Pkinase 1.5e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00533 - - gmx:100794136 786.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00533 11 7897786 7905834 Cca11g00533 11 7897786 7905834 ECH