Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00524 ATGAACGGTTTTAGTGCAAATTTGTCACCCAGAGAGTTTGAGGCTCTTAAAAGATCTCCAGGTTACATTTCTTCCATACCATATTTGCCAACCAAGCTTGATACAACACATTCATCTCAATTCCCTTGCCTCAATCCCAATAAGGGGGCTTGGCTTACAGTTCTAGAGGACCATCAAATAGCATGCCCTCACGTGACAGGTGTGGGAGCAATGTTAAGAGCAGCACACCTCGATTGGAGCGTTGCAGCCATTAGGTCAGCCATCATGACAACATCAGACATTTTCGACAACACCATGGGACTCATCAAAGACATTGGTGATGATTACAAACCACCCTTTCCTTTAACCTCGGGAGCTGATCATATCAACCCCAACAAAGCCCTTCATCCTGGACTTGTTTACTCGTGGGAGTACAATATTATGTCAATCTTCTCTGTGCTCTAA 444 0.4437 MNGFSANLSPREFEALKRSPGYISSIPYLPTKLDTTHSSQFPCLNPNKGAWLTVLEDHQIACPHVTGVGAMLRAAHLDWSVAAIRSAIMTTSDIFDNTMGLIKDIGDDYKPPFPLTSGADHINPNKALHPGLVYSWEYNIMSIFSVL 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00524 147 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 59 135 IPR045051 -
Cca11g00524 147 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 47 IPR045051 -
Cca11g00524 147 SUPERFAMILY Subtilisin-like 61 132 IPR036852 GO:0004252|GO:0006508
Cca11g00524 147 Gene3D Peptidase S8/S53 domain 60 136 IPR036852 GO:0004252|GO:0006508
Cca11g00524 147 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.9 59 135 - -
Cca11g00524 147 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.9 2 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00524 Cca-Chr11 7450751 7451194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00524 52 137 Subtilisin-like Serine Gene Family AT1G04110 45.349 4.67e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00524 - - gmx:100781249 129.798