Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00523 ATGGCTACCCATATTtctctctctctctctttcttctACATCACAACCCTTCAAATTATTTCCACGTTGGCTCAGTCAGATAACTACATCATCCACATGGACATATCAGCCATGCCCAAAGCATTCTCTACCCAACACGCTTGGTACCTCTCCGCTCTCTCTTCAGCACTAGACAATTCCAAAGCCACCCCCGACAACCTCAACGTCATTGCCACTTCTAGTTCTAAGCTCATTTACACCTACACAAATGTCATGAACGGTTTCAGTGCCAACTTGTCACCGAAAGAACTCGAAGCTATCAAAACCACCACGGGCTACGTTTCATGCATGCGAGACTCACCAGCCAAGCGTGACACAACGCACTGTCCACACTTCCTTGGCCTCAACGCGAACCAAGGGGCGTGGCGGGTGGCGGAGTTTGGAAAAGATGTCATCGTTGGTTTGGTGGACACAGGAGTTTGGCCAGAAAGTGAAAGCTTCAGAGACGAGGGAATCACCGAGATTCCTTCGCGGTGGAAAGGCCAATGCGAAAGTAGCATCAAATGCAACAAGAAACTCATTGGAGCGCGGTTCTTTAACAAAGGGTTGCTGGCAAAGCACCCCAACGTTACCACATTGAACTCAACACGTGACACCGAGGGTCACGGGACTCACACGTCGACCACCGCAGCTGGGAGCGTGGTTGAGGGTGCATCGTATTTTGGTTATGCGACAGGATCAGCAAGAGGAATAGCTTCAGGTGCGAGAGTGGCAATGTACAAGGCTTTGTGGGAAGAAGGAGGTTACACGTCTGATATAATAGCTGCAATCGATAGTGCAATATCAGATGGTGTGGATGTTCTTTCCTTGTCATTTGGCCTCGACGGTTTAGCTTTGTACGAGGATCCTGTTGCTATAGCCACGTTTGCAGCCGTGGAGAGAGGGATTTTTGTGTCCACGTCAGCAGGAAACGAAGGACCTTTCCTTGGAACTTTGCATAACGGAATACCATGGGTCATAACCGTGGCTGCTGGCACTATGGACCGTGAATTTCACGGGACTCTTAGACTCGACAATGGAGTAGAAATAGATGGCATGTCTCTCTACCACGGAAACTTCACTCCCAGCCACGTGCCAATTGTTTTCATGGGCTCGTGCGACAAAGTGAAGAAGCTTGTGAAAGTGAGGAGCAAGATTGTGGTGTGTGAGGACAAGAATGGAACGGTCTTTGATCAAGTGTCCAATGTGGATAAGGCAAATGTTGTGGCGGCAGTGTTCATATCAAACGACTCCGATTCTTTTTTGTTGGATAATAGGTTTGCATCTATTATTGTCACTCCTACAAACGGGGAAATCGTCAAAGCTTACATTAGTAATAGTACTGCTAATAGTGCAAAAGCAAGCATGTCCTTTAAGAAGACGCTGTTGGGTGCTACCCCAGCACCGAGTGTGGATAGTTACAGTTCTCGAGGTCCTTCAAGTAGTTGTCCATTTGTGTTGAAACCGGACATAACTGCTCCTGGCTCATCAATCCTAGCTGCATGGCCTCAAAATGTTCCTGCGGAAGTGTTCGGTTCCATAAACGTTTTCAGCAACTTCAACTTACTAAGTGGCACATCCATGGCATGCCCCCATGTTGCTGGCATAGCAGCACTGTTGAGAGGAGCACACCCTGGATGGAGCGTTGCAGCCATTAGGTCAGCCATCATGACAACATCGGATATGTTGGACAACACCATGGGACTCATCAAAGACGTTGGTGATGATTACAAACCAGCCTCTCCTTTGGCCATGGGAGCTGGTCATGTCAACCCTAATAGAGCCCTTGACCCTGGACTCATCTACGACGCGGGAACACAAGATTATGTTAACCTCCTCTGCGCACTTGGCTACACCCAAAAGAACATCACTGCCATCACCAGAACCTCCTCCAATGATTGTTCCAAACCCTCTTTGGACCTCAACTACCCTTCTTTCATTGCTTTCTTCCAAGGCAATGGTTCGAGGGAAGCTCGGGAATTTAAGAGAACGGTGACCAATGTTGGGGAGGGGCAAACAATCTATGTTGCGAGCATTACATCTGTGAGAGGGTACCACGTTAGCGTCTTCCCTAACAAGTTGGAGTTCAAGGAGAAGAATGAGAAGCTAAGTTACAAGTTGAGAATTGAAGGTCCAAGAAATAGGAAAGAGAAGAGTGTGGCTTTTGGGTATCTCAGTTGGACGGACGTGAAGCATGTGGTTAGAAGCCCCATTGTGGTCACCACCATTAGATTCGAATTCTAG 2262 0.4757 MATHISLSLSFFYITTLQIISTLAQSDNYIIHMDISAMPKAFSTQHAWYLSALSSALDNSKATPDNLNVIATSSSKLIYTYTNVMNGFSANLSPKELEAIKTTTGYVSCMRDSPAKRDTTHCPHFLGLNANQGAWRVAEFGKDVIVGLVDTGVWPESESFRDEGITEIPSRWKGQCESSIKCNKKLIGARFFNKGLLAKHPNVTTLNSTRDTEGHGTHTSTTAAGSVVEGASYFGYATGSARGIASGARVAMYKALWEEGGYTSDIIAAIDSAISDGVDVLSLSFGLDGLALYEDPVAIATFAAVERGIFVSTSAGNEGPFLGTLHNGIPWVITVAAGTMDREFHGTLRLDNGVEIDGMSLYHGNFTPSHVPIVFMGSCDKVKKLVKVRSKIVVCEDKNGTVFDQVSNVDKANVVAAVFISNDSDSFLLDNRFASIIVTPTNGEIVKAYISNSTANSAKASMSFKKTLLGATPAPSVDSYSSRGPSSSCPFVLKPDITAPGSSILAAWPQNVPAEVFGSINVFSNFNLLSGTSMACPHVAGIAALLRGAHPGWSVAAIRSAIMTTSDMLDNTMGLIKDVGDDYKPASPLAMGAGHVNPNRALDPGLIYDAGTQDYVNLLCALGYTQKNITAITRTSSNDCSKPSLDLNYPSFIAFFQGNGSREAREFKRTVTNVGEGQTIYVASITSVRGYHVSVFPNKLEFKEKNEKLSYKLRIEGPRNRKEKSVAFGYLSWTDVKHVVRSPIVVTTIRFEF 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00523 753 CDD PA_subtilisin_like 347 459 - -
Cca11g00523 753 Pfam Subtilase family 141 572 IPR000209 GO:0006508|GO:0008236
Cca11g00523 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 18 750 IPR045051 -
Cca11g00523 753 Pfam Fibronectin type-III domain 646 746 IPR041469 -
Cca11g00523 753 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Cca11g00523 753 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Cca11g00523 753 PRINTS Subtilisin serine protease family (S8) signature 530 546 IPR015500 -
Cca11g00523 753 Gene3D Peptidase S8/S53 domain 143 615 IPR036852 GO:0004252|GO:0006508
Cca11g00523 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 116 IPR037045 -
Cca11g00523 753 SUPERFAMILY Subtilisin-like 118 606 IPR036852 GO:0004252|GO:0006508
Cca11g00523 753 CDD Peptidases_S8_3 118 567 IPR034197 -
Cca11g00523 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 531 541 IPR023828 -
Cca11g00523 753 ProSiteProfiles Serine proteases, subtilase domain profile. 125 602 - -
Cca11g00523 753 Pfam Peptidase inhibitor I9 29 115 IPR010259 -
Cca11g00523 753 Gene3D - 341 469 - -
Cca11g00523 753 Gene3D - 619 749 - -
Cca11g00523 753 PANTHER PUTATIVE-RELATED 18 750 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00523 Cca-Chr11 7444554 7447023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00523 1 735 Subtilisin-like Serine Gene Family AT5G67090 44.960 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00523 - - gmx:100786751 1161.36