Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00505 ATGATGGAGTTGGGGGGTTCGATGGTGATCGGGGATTACATAGTGGGTCCTCGAATCGGGTCGGGTTCGTTCGCGGTGGTGTGGCGTTCAAGGCATCGAATTTCGGGTTTGGAGGTTGCGGTTAAGGAGATTGATAAGAGACAACTCAGTCCCAAAGTCAGAGAAAATCTTCTCAAAGAGATTTCTATCCTCAGCACCATCAATCACCCCAACATCATTCGACTCTTCGAGACAATTCAGACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGCTGGTGGGGACCTCGCTGCTTACATTCATCGCTATGGCAGAGTTTCTGAGCCCGTTGCACGCCATTTCATGAGGCAATTGGCTGCTGGGTTGCAGGTACTTCAAGAAAAGAACCTCATTCATAGAGACTTAAAACCACAGAATTTACTATTGGCAACGACTGCAGCTACACCGGTTATGAAAATAGGGGATTTTGGTTTTGCAAGGTCTCTAACACCCCAGGGATTGGCTGATACACTATGTGGTTCACCCTATTACATGGCTCCAGAGATAATTGAAAATCAAAAGTATGATGCCAAGGCTGATTTATGGAGTGTTGGGGCAATATTGTATCAACTAGTTATTGGGAGGCCACCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAAAATATTTTGGCATCTACTGAACTGCACTTTCCATCAGAGGCATTAAATGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAATCTTTTACGTCGAAATCCAGATGAGAGATTAACATTCAAGGCATTCTTCAATCACAGTTTCCTACAGGAACCCAGGCCCACCATGAATGTTGAGCAGCTTCAATTTCATCTATCAGAAAGAGTGACAGTTCATCAATTAGGTGGCTCTGCCTCCAAGAAGATGTCTCAATCACATTCTAAGTATCATGTTGAGTCATCTATAGATGATCCAGCTGTAGTCAGTTCAGCTGTCAATGAAACAATGCCATTGCAAAGAAAAGATGGCAAGATTACTGCTGGCACTGAGAGTGTTAAAGTGTCAACTCCAACTATTGCAAGTGATAATCTGGGGAAGACTGTTGATGCTGGTGCTCATTTGCCAAACCAACCTCGAGTTTCCCGTTTAATGGAGTCCATTGAGAAAGATTATGTCCTTGTCAATTCCCATTTTGCTTCATTGGAGGCATTCTCTGACTACTATGAGGCATCTGTGCAAGATAATTCACGCAGGATCTCCATGTTTCCGTCAAAGAGGTCTAACCTGGTGATTGGAGTTGCAAATCAAACAAAGGGTCTGTCCTCTTCCTCCACTGAAGGATTAGAAAATTTAAATAGTAGGAAACTTGAGGCATGTGTGGCATCCTGTGAATTTGCTGCCTCAAGGGAAGAGCAGGGAATTTCCTCATTACACCCTTCAAACAGATTAGAGTTTTTGCATCAGTATGTGTATATCCTTGCTGAACTTTCACAAGAAAAGTATAATAAAGGACTGTTTCTAGAGTCGCTTGCAGTTGAGTTGGTGGTTTTGGCTATATGGAAGAAGGCTCTAGAAATTTGTAGTTCTTGGCTGGCCTCCATTGCTAAGAGTGAGTTTCCTGGAAGCAGTTCAGCTAATGAGTCCATATCTGCCAGTGAAGTGGACTTACCACAGACTACAGAACAGAAAATAAATTTCAGTGATCCTGCATCTATCTCCCTGTGGGCCAAACATGAGTTTATTGTTGCGGTTGATCGTGCTGAGAAACTATCATGTCATATTCAAAATATGGATGGGGCATCTGAGATGCCAGATGCAATGGAAATTATATTCCAAAAGGCTCTCCTAATCGGGACAAGTGGTTGTGTAGATGAATATATGGAGAACAGAGATAGGGCTGCTGCATCTTACTCAAAAGCGATGCTTCTACTTTCATTTATTGTGGGAGAAGCAGAGAACCTTCCGCTGAACCCGCCATTTTCACTTATTGACACTAATAAGGAGCGAATCTTACAATATATTCACAGATTGCAGTCTCGGAAAAAATCTTCATTAGAGTCCTCTTCAAAGAAAGCACATACACTTTTATCAAAGTAA 2082 0.4227 MMELGGSMVIGDYIVGPRIGSGSFAVVWRSRHRISGLEVAVKEIDKRQLSPKVRENLLKEISILSTINHPNIIRLFETIQTNDRIYLVLEYCAGGDLAAYIHRYGRVSEPVARHFMRQLAAGLQVLQEKNLIHRDLKPQNLLLATTAATPVMKIGDFGFARSLTPQGLADTLCGSPYYMAPEIIENQKYDAKADLWSVGAILYQLVIGRPPFDGNSQLQLFQNILASTELHFPSEALNELHSDCLDLCRNLLRRNPDERLTFKAFFNHSFLQEPRPTMNVEQLQFHLSERVTVHQLGGSASKKMSQSHSKYHVESSIDDPAVVSSAVNETMPLQRKDGKITAGTESVKVSTPTIASDNLGKTVDAGAHLPNQPRVSRLMESIEKDYVLVNSHFASLEAFSDYYEASVQDNSRRISMFPSKRSNLVIGVANQTKGLSSSSTEGLENLNSRKLEACVASCEFAASREEQGISSLHPSNRLEFLHQYVYILAELSQEKYNKGLFLESLAVELVVLAIWKKALEICSSWLASIAKSEFPGSSSANESISASEVDLPQTTEQKINFSDPASISLWAKHEFIVAVDRAEKLSCHIQNMDGASEMPDAMEIIFQKALLIGTSGCVDEYMENRDRAAASYSKAMLLLSFIVGEAENLPLNPPFSLIDTNKERILQYIHRLQSRKKSSLESSSKKAHTLLSK 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00505 693 CDD STKc_ATG1_ULK_like 19 270 - -
Cca11g00505 693 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Cca11g00505 693 PANTHER BNAC06G18300D PROTEIN 9 667 - -
Cca11g00505 693 SMART serkin_6 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00505 693 ProSiteProfiles Protein kinase domain profile. 13 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00505 693 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 9 667 IPR045269 GO:0004674|GO:0006914
Cca11g00505 693 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00505 693 Gene3D Transferase(Phosphotransferase) domain 1 6 342 - -
Cca11g00505 693 SUPERFAMILY Protein kinase-like (PK-like) 9 320 IPR011009 -
Cca11g00505 693 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00505 Cca-Chr11 7137611 7142939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00505 9 289 CBL-interacting serine-threonine protein kinases AT2G30360 33.798 8.73e-50 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Cca11g00505 Pkinase 4.9e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00505 - K08269 gmx:100779262 1111.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00505 11 7137611 7142939 Cca11g00505 11 7137611 7142939 ECH