Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00469 ATGTTCACGGTTAGCTCCAAAGTTTTAGAATCTAGGCATCGAGGTGCGATTCTGGCTTTAGTGAAGCATCTTCAGGCGTCGCCTCTTAGTGACCACGTCCAGAAGCCATTACCGTTCGAGCACGAGGTTGAGAAAGGGAGTGCTATCGCACTAGGACTTCTCGCCGTCAAGATGTTCCTTAGCATTTTGCAAGTTCTGAAGTATATATACGAGATTATGATTGTTCCAGATGCTCCTAAGCTTGCGAAGGAGAATTTGGAGAAGATGTGGCCCATGACTGCCCATGAGAAGATCATGACCGCCACTCTATTTCTCACGGTGGGACTTTGGGTATTTGGAGGGCTTCTTAATATTGATGCTATATCTGCTGTAATTCTTGGATCAGTTGTACTTCTTGTCACTGGGGTTGTAACTTGGAAGGAGTGCTTAGTTGAAGGAGTTGCCTAG 447 0.4586 MFTVSSKVLESRHRGAILALVKHLQASPLSDHVQKPLPFEHEVEKGSAIALGLLAVKMFLSILQVLKYIYEIMIVPDAPKLAKENLEKMWPMTAHEKIMTATLFLTVGLWVFGGLLNIDAISAVILGSVVLLVTGVVTWKECLVEGVA 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00469 148 Pfam Sodium:sulfate symporter transmembrane region 48 142 IPR001898 GO:0016020|GO:0022857|GO:0055085
Cca11g00469 148 PANTHER DICARBOXYLATE TRANSPORTER 1, CHLOROPLASTIC 43 148 - -
Cca11g00469 148 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 43 148 IPR030676 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00469 Cca-Chr11 6508578 6510770 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00469 47 148 Antiporters AT5G12860 57.843 1.20e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00469 - - gmx:100793559 127.102