Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00462 ATGGCACCATTTCCCTGCTTCCACGCCTTCGTGTTGCTCTTCTTCATTTGGACACTCGCTGCTTCTTTGGACCTAGAGAAGAGAAGCACGTTCATAATCCAAGTCCACCGCGACGCCAAACCCTCCGTATTCCAAACGCACAAGCACTGGTACCAATCCTCCCTCTCTTCTATTTCCACCACCGCTTCCATAATCCACACATACGACACCGTTTTCCACGGCTTCTCCGCCAAGCTAACCACTTCAGAGGCGCACAGAGTGGAAACACTCAGCCACGTCATCGCCCTCATTCCCGAGCAAGTTCGCAAGCCGCACACCACGCGCTCGCCGCAGTTCCTCGGCCTCACCACCGCCGACCGAACCGGTTTGCTCCACGAGACCGATTTCGGCTCCGATCTCGTCATCGGAGTTATCGACACCGGAATCTGCCCGGAGAGGCAGAGCTTCAACGACCGCGACCTCGGCCCCGTTCCGCCCAAATGGAAGGGCCAGTGCGTCGCCGGGGACAATTTTCCGGCCACCTCCTGCAACCGGAAACTCATCGGAGCCAGATACTTCTTCGCCGGCTACGAGGCCACCAACGGCAAGATGAACGAAACCACGGAGGTTCGCTCTCCGCGTGACACCGACGGCCACGGCACTCACACGGCGTCCATTGCCGCCGGCCGCTACGTCTCGCCGGCGTCCACGCTCGGCTACGCCAAGGGCGTCGCCGCCGGGATGGCGCCCAAGGCGCGCCTCGCCGTGTACAAGGTATGCTGGAGCAGCGGCTGCTTCGACTCCGACATCCTCGCCGCGTTTGACGCCGCCGTCGCAGACGGCGTCGACGTGGCGTCATTGAGCGTCGGCGGCGTGGTGGTTCCCTACCACCTTGATGTGATTGCTATTGGCGCCTTCGGCGCCGCCTCTAACGGCGTTTTTGTCTCCTCCTCCGCCGGAAACGGCGGCCCCGGCGGGCTTACGGTGACCAATGTGGCGCCGTGGGTGACCACTGTCGGCGCCGGGACCATGGATAGGGATTTTCCTGCGGATGTTAAGCTTGGAAATGGTAAAATTGTACCTGGGGTTGGTATCTACGATGGACCGGGTTTAACTCCGGGTCGAATGTACCCGGTAGTGTATGCTGGTGTAGAACAATTTGGTGGTGGTGATGGTTATTCATCTTCACTTTGTTTAGAAGGTTCCTTGGATCCCAAGTTTGTTAAGGGGAAAATTGTTGTGTGTGATAGAGGCATTAATTCAAGGACTGCGAAGGGTGCGGAGGTGAAAAAAAATGGAGGGGTTGGCATGATTTTGGCCAATGGTGTGTTTGATGGTGAAGGATTGGTGGCTGATTGCCACGTGTTGCCCGCCACTTCGGTCGGTGCCACCAGCGGCGACGAAATCCGGAGGTACATTGGGAGTTCGCGGTCGCCAGCGACTGCTACAATTGTGTTCAAAGGGACTAGGCTTGGTGTAAGGCCAGCTCCTGTGGTGGCATCATTTTCAGCAAGAGGGCCTAACCCTGTTTCCCCTGAGATTTTGAAGCCTGATGTTATTGCCCCAGGGTTGAACATTCTTGCAGCTTGGCCTGACCATGTTGGGCCTTCTGGTCTTCCCTCTGATGGGCGCAGGACTGAGTTCAACATTCTCTCTGGGACTTCCATGGCTTGCCCTCATGTTTCTGGTTTGGCTGCTTTGTTAAAAGCAGCACACCCTGATTGGAGTCCTGCTGCTATTAGGTCTGCTTTGATGACCACTGCTTACACTGTTGACAATAGGGGTCACCCCATGTTGGATGAGTCCACTGGGAACGTTTCCTCAGTGTTTGATTATGGTGCTGGCCATGTTCATCCTGAGAAGGCCATGAACCCCGGATTGGTTTATGATATCTCCACTTCTGATTATGTGAATTTCTTGTGCAATTCCAATTATACCACTAAGACCATCCATGTGATCACTAGGAAAAATGCTGATTGCAGTGGGGCTAAGAGAGCTGGACATTCTGGGAACCTGAATTACCCTTCTTTGTCTGCAGTGTTTCAGCAATATGGAAAGAGGAGAATGTCTACTCACTTTATTAGGACTGTGACCAATGTTGGGGACCCAAATTCAGTGTACAAGGTCACCATTAATCCACCAGGGGGAATGGTGGTCACAGTGAAGCCAGAGACTCTGACTTTCAAGAGGGTGGGGCAGAAGTTGAGCTTTCTTGTTAGGGTACAAACTAGGGCGGTTAAGCTTTCCCCTGGAGGTTCTAGTGTCAAGAGTGGTTCCATTGTTTGGTCTGATGGGAAGCATATTGTCACAAGTCCCCTGGTTGTGACAATGCAGCAACCTCTGGAGTAG 2328 0.5438 MAPFPCFHAFVLLFFIWTLAASLDLEKRSTFIIQVHRDAKPSVFQTHKHWYQSSLSSISTTASIIHTYDTVFHGFSAKLTTSEAHRVETLSHVIALIPEQVRKPHTTRSPQFLGLTTADRTGLLHETDFGSDLVIGVIDTGICPERQSFNDRDLGPVPPKWKGQCVAGDNFPATSCNRKLIGARYFFAGYEATNGKMNETTEVRSPRDTDGHGTHTASIAAGRYVSPASTLGYAKGVAAGMAPKARLAVYKVCWSSGCFDSDILAAFDAAVADGVDVASLSVGGVVVPYHLDVIAIGAFGAASNGVFVSSSAGNGGPGGLTVTNVAPWVTTVGAGTMDRDFPADVKLGNGKIVPGVGIYDGPGLTPGRMYPVVYAGVEQFGGGDGYSSSLCLEGSLDPKFVKGKIVVCDRGINSRTAKGAEVKKNGGVGMILANGVFDGEGLVADCHVLPATSVGATSGDEIRRYIGSSRSPATATIVFKGTRLGVRPAPVVASFSARGPNPVSPEILKPDVIAPGLNILAAWPDHVGPSGLPSDGRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIRSALMTTAYTVDNRGHPMLDESTGNVSSVFDYGAGHVHPEKAMNPGLVYDISTSDYVNFLCNSNYTTKTIHVITRKNADCSGAKRAGHSGNLNYPSLSAVFQQYGKRRMSTHFIRTVTNVGDPNSVYKVTINPPGGMVVTVKPETLTFKRVGQKLSFLVRVQTRAVKLSPGGSSVKSGSIVWSDGKHIVTSPLVVTMQQPLE 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00462 775 Gene3D - 633 771 - -
Cca11g00462 775 Pfam Fibronectin type-III domain 664 768 IPR041469 -
Cca11g00462 775 SUPERFAMILY Subtilisin-like 104 620 IPR036852 GO:0004252|GO:0006508
Cca11g00462 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 105 IPR037045 -
Cca11g00462 775 CDD PA_subtilisin_like 344 477 - -
Cca11g00462 775 Gene3D Peptidase S8/S53 domain 132 629 IPR036852 GO:0004252|GO:0006508
Cca11g00462 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 546 556 IPR023828 -
Cca11g00462 775 ProSiteProfiles Serine proteases, subtilase domain profile. 110 616 - -
Cca11g00462 775 Pfam Peptidase inhibitor I9 30 103 IPR010259 -
Cca11g00462 775 Pfam Subtilase family 130 598 IPR000209 GO:0006508|GO:0008236
Cca11g00462 775 CDD Peptidases_S8_3 103 582 IPR034197 -
Cca11g00462 775 Gene3D - 338 485 - -
Cca11g00462 775 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.5 27 774 - -
Cca11g00462 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED 27 774 - -
Cca11g00462 775 Pfam PA domain 370 462 IPR003137 -
Cca11g00462 775 PRINTS Subtilisin serine protease family (S8) signature 130 149 IPR015500 -
Cca11g00462 775 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Cca11g00462 775 PRINTS Subtilisin serine protease family (S8) signature 545 561 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00462 Cca-Chr11 6407411 6410349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00462 30 774 Subtilisin-like Serine Gene Family AT3G14240 76.431 0.0 1172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00462 - - gmx:100819529 1358.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00462 11 6407411 6410349 Cca11g00462 11 6407411 6410349 ECH