Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00438 ATGATGGGGACTTCCATGGTCATAGCAGACGGCATTTTCACTCCAGCGGTTTCAGTTCTATCTGCAGTAAGCGGGACCAGTACCTCATTAGGTCAAGAAGCTGTTGTGGGGATTTCTGTAGCAATATTGGTTGTCCTTTTTTCTCTGCAACGATTTGGCACTGATAGAGTAGGATCTTCATTCGCTCCAATTCTCATAGTGTGGTTTTCATTCATTGCTGGAATTGGTTGGTTTTCATTCGGTGGAGTCTTACTATGCATCACAGGATCTGAGGCAATGTTTGCTGACTTGGGTCACTTTAGTGTGCGAGCCATTCAAATACAATGGCAATGGTAA 336 0.4405 MMGTSMVIADGIFTPAVSVLSAVSGTSTSLGQEAVVGISVAILVVLFSLQRFGTDRVGSSFAPILIVWFSFIAGIGWFSFGGVLLCITGSEAMFADLGHFSVRAIQIQWQW 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00438 111 Pfam K+ potassium transporter 1 77 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca11g00438 111 PANTHER POTASSIUM TRANSPORTER 5 1 78 - -
Cca11g00438 111 PANTHER POTASSIUM TRANSPORTER 5 76 109 - -
Cca11g00438 111 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 78 IPR003855 GO:0015079|GO:0016020|GO:0071805
Cca11g00438 111 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 76 109 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00438 Cca-Chr11 6033128 6034491 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00438 1 109 Inorganic Solute Cotransporters AT4G13420 57.857 3.00e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00438 K03549 - gmx:100798735 177.563