Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00425 ATGGAGAGCCTCCCGCTGGAGACGGCGGAGAAGATAATCCTCCGGTGGGACTCGACGGCGTCGGAGGAGGCGCGCGACAAGATGATATTCTCCGGCGACAGGGAGGACGCCGATCTCTACCTGCAGGCGGTGGACGAAATCCAGCGCTCGCTCTCCTCCGTCACAGTCTCCGATAAAGTGAACTCCGCCATTCAGATCGCGATGGCGCGCTTGGAAGACGAGTTCCGGAACATCCTCATCTCGCACACCAACGCCTCCTTCGACCCTACCTCAGAAGAAGAATCTCACCAACCGAATCAAGACCCTCCTTCTTCCTCTTCCTCGCCGAAGCACCCTCGCAACAACGACGATAGCGACGAAGTTGAGAAGACCTCGCTGCTCCTCCGCTTCGACAGCGACGGCGCCGCCTCCAGCGCCGCCAGCAGCTACCGCTCCACGAGCAGCATCCGCGAGCTCGATCTCCTCCCCGCCGACGCCGTCTACGACCTCCGCTGCATCGCCGAGCGCATGGTCTCCTCCGGCTACCTCCGCGAGTGCATCCAGGTCTACGGCAGCGTCAGAAAATCCTCCGTCGACGCGAGCTTCCGCAAGCTCGGCGTCGAGAAGCTCAGCATCGGCGACGTGCAGCGCCTCGAGTGGGAGCAGCTCGAGAACAAAATCCGGCGATGGATACGCGCCGCCAAGGTGTGCGTTAGAACCATCTTCGCCAGCGAGAAGAAGCTCTGCGAGCAAATCTTCGACGGCGTCGGAACCGCCATCGACGACGCCTGCTTCATGGAGACCGTCAAAGGTCCTGCTATTCAGCTCTTCAACTTCGCCGAGGCGATTAGTATCAGTCGCCGGTCGCCGGAGAAGTTGTTTAAGATTCTCGATTTGCATGATGCTTTGACTGATTTGATGCCTGATATTGACGTTGTTTTTGATTCCAAGTCCTCGGAGTCGATTAGGGTTCAGGCTGCTGAGATTTTATCCCGTTTGGGTGAGGCCGCGAGGGGTATTTTGTCTGAATTTGAAAACGCTGTGCTTAGGGAACCTTCTAGGGTTCCTGTTCCTGGTGGCACGATTCACCCTTTGACACGTTATGTTATGAATTATATAAGTTTGATCTCTGATTATAAGGTTACTTTGAATGAGCTTATAGTGTCTAAGCCTTCCACGGGGTGTAGGTACTCCGGGGATCCTGGGATACCTGATATGGATTTGGGGGAGTTTGAGGAGAAGACTCCTTTGGATGTTCACTTGATTTGGATTATTGTGATTTTGCAATTCAACTTGGATGGGAAGTCCAAGCACTATAAGGATGCCTCTCTGGCTCACTTGTTTGTGATGAACAATGTGCACTACATTGTTCAGAAGGTGAGAGGGAGTCCCGAGTTGAGGGAGATGATTGGGGATGACTATTTGAAGAAGCTTACCGGGAAGTTCCGGCAGGCGGCCACGAGTTACCAGAGGGCTACCTGGGTGAGGGTGTTGTATTGCTTGAGGGATGAGGGGTTGCATGTGAGTGGGGGGTTTTCTTCTGGGGTGTCCAAGAGTGCTCTAAGGGAGAGGTTCAAGGCCTTCAATGGGATGTTTGAGGAGGTTCATAGGACTCAGGCAGTCTGGCTGATACCGGATTCACAGCTCAGGGAGGAGCTGAGGATATCGATATCAGAGAAGCTGATTCCCGCGTATAGGTCGTTTCTTGGGCGGTTCAGGAGCCACATAGAGAGTGGTAGGCATCCGGAGAATTACATCAAGTACTCTGTGGAGGACCTGGAGGATGCTGTTTTGGACTTTTTTGAAGGGATTCCTGTTTCCCAGCACTTGAGGAGGAGATCTgagtga 1827 0.5391 MESLPLETAEKIILRWDSTASEEARDKMIFSGDREDADLYLQAVDEIQRSLSSVTVSDKVNSAIQIAMARLEDEFRNILISHTNASFDPTSEEESHQPNQDPPSSSSSPKHPRNNDDSDEVEKTSLLLRFDSDGAASSAASSYRSTSSIRELDLLPADAVYDLRCIAERMVSSGYLRECIQVYGSVRKSSVDASFRKLGVEKLSIGDVQRLEWEQLENKIRRWIRAAKVCVRTIFASEKKLCEQIFDGVGTAIDDACFMETVKGPAIQLFNFAEAISISRRSPEKLFKILDLHDALTDLMPDIDVVFDSKSSESIRVQAAEILSRLGEAARGILSEFENAVLREPSRVPVPGGTIHPLTRYVMNYISLISDYKVTLNELIVSKPSTGCRYSGDPGIPDMDLGEFEEKTPLDVHLIWIIVILQFNLDGKSKHYKDASLAHLFVMNNVHYIVQKVRGSPELREMIGDDYLKKLTGKFRQAATSYQRATWVRVLYCLRDEGLHVSGGFSSGVSKSALRERFKAFNGMFEEVHRTQAVWLIPDSQLREELRISISEKLIPAYRSFLGRFRSHIESGRHPENYIKYSVEDLEDAVLDFFEGIPVSQHLRRRSE 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00425 608 Pfam Exo70 exocyst complex subunit 222 590 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca11g00425 608 SUPERFAMILY Cullin repeat-like 34 595 IPR016159 -
Cca11g00425 608 Gene3D Exocyst complex component Exo70 12 604 - -
Cca11g00425 608 MobiDBLite consensus disorder prediction 86 120 - -
Cca11g00425 608 PANTHER EXOCYST COMPLEX PROTEIN EXO70 4 607 IPR004140 GO:0000145|GO:0006887
Cca11g00425 608 MobiDBLite consensus disorder prediction 86 111 - -
Cca11g00425 608 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 4 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00425 Cca-Chr11 5825873 5828466 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00425 6 608 EXO70 exocyst subunit family AT1G72470 70.340 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00425 K07195 - gmx:100808671 1046.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00425 11 5825873 5828466 Cca11g00425 11 5825873 5828466 ECH