Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00413 ATGGCTACCAAAttctctctgcttcttttcctttccttctctctctttttctttctgtcgttttctgtttcATCGGACGCTCCACGAACCTACATAGTCCACGTGGCGCAATCCCAGAAGCCCACGCTATTCGCCGCGCACCACCACTGGTACAACTCCATCCTCCGCTCCCTGCCCCCCTCCGCGCACCCGCCCACCCTCCTCTACACCTACTCCGCCGCCGCCGAAGGCTTCTCCGCCCGCATCTCCCCCTCCCAGCTCCCCCACCTGCGGCGCGCCCCGGGGGTCCTCGCCGTGGAGCCCGACCAGATCCGGCAGCCCCACACCACCCGCACGCCGCGCTTCCTGGGGCTGGCGGACTCCTTCGGGCTCTGGCCCAACTCCGACTACGCGGAGGACGTCATCGTGGGCGTCCTGGACACGGGAATCTGGCCGGAGCTGGGCAGCTTCTCGGACCACAACCTCTCCCCCGTCCCCGCCACGTGGAAAGGGACGTGCCAAAGCTCCCCCGACTTCCCCTCCTCCCTCTGCAACAGAAAAATCATCGGCGCCAAAGCTTTCTTCAGAGGCTATGAATCCTACCTCGAGAGACCCATCGACGAGTCCGTCGAATCCAAGTCTCCCAGAGACACCGAAGgccacggcacgcacacctcctccaccgccgctggcgccgccgtctccaacgccagccTCTTCCACTACGCGCAGGGCCAAGCGCGTGGAATGGCCTCCAAAGCCAGAATCGCCGCCTACAAAATCTGCTGGAGTCTCGGCTGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTCGCCGCCATGGACGACGCCGTCTCCGACGGCGTCCACGTCATCTCCCTCTCCGTCGGCGCCAACGGTTACGCACCTCAGTACTTCCGCGACTCCATCGCCATCGGCGCCTTCGGAGCTTCTCGACACGGCGTTCTCGTGTCTTGCTCCGCCGGGAACTCCGGTCCCGGTCCTTTCACCGCCGTGAACATCGCGCCGTGGATTTTAACCGTTGGAGCTTCGACCATCGATCGCGAGTTTCCCGCGGATGTTATTCTGGGCGATGGTAGGGTTTTGAACGGTGTGTCCTTATATTACGGTGATTCCTTACCCGATTTCAATCTTCCTTTGGTTTACGCCGCGGATTGTGGAGGTAGATACTGTTACATGGGGTCTCTAGAATCTTCGAAAGTTCAAGGGAAGATCGTTGTGTGCGATCGAGGAGGCAACGCTAGAGTTGAGAAAGGTAGTGCAGTGAAGCTGGCTGGTGGGTTGGGAATGATTTTAGCCAACACTGAAGCGAGCGGTGAAGAGCTTCTCGCTGATGCTCATCTTCTGGCTGCTACTATGGTGGGTGAAACCGCAGGGAATAAAATCAAGGAGTATATAAAGCTGAGTCAGTACCCTACTGCTACGATCGAGTTTAGAGGCACTGTGATTGGTGGTTCTCCTTCTGCGCCTCAAGTTGCTTCCTTTTCTAGCCGTGGACCGAATCACCTCACTCCGCAGATTCTGAAGCCTGATGTTATTGCTCCCGGGGTTAACATTTTGGCAGGCTGGACTGGTCGTGTGGGCCCCACCGATTTGGACCTTGATCCTAGGAGGGTCGAGTTTAACATAATTTCGGGGACTTCTATGTCGTGTCCTCATGCTAGTGGCATTGCTGCTTTGCTTAGGAAGGCGTATCCTGAGTGGTCACCTGCGGCTATTAAGTCTGCTCTGATGACTACGGCTTATAATGTTGATAATTCTGGTGGGAATATTAAGGATCTCGCAAGTGGCAAGGAGTCAGATCCGTTCATTCATGGGGCTGGTCATGTTGATCCCAATAGGGCACTTAATCCCGGGTTGGTTTATGATTTGGATACTGAGGACTACTTGGCCTTTTTGTGTTCAATTGGGTACGATGCTAGTAAGATCGCGGTTTTCACTAGAGAGCCTGCTGGTGGGGATGTTTGTGAAGGGAAAGTGGGTAGGTTGGGTAATCCGGGTGATTTAAATTACCCTTCTTTCTCTGTGGAGTTGGGTGGAGGAAGCGGGGTGGTTAAGTACAAAAGGCTTGTTACTAATGTGGGAAGTGAGGTTGATGCTGTTTACACTGTTAAAGTGAGTGCTCCACCTGGTGTTGCTGTTAGTGTTTCACCCAGCACGCTTGTGTTCAGTGGTGGAAGCAAGACGCAGGCATTTGAGGTGGCGTTTACCAGAGTTGCCTACGCTGGTTCTCAGAGTTTTGGGTCCATTGAGTGGACTGATGGAAGCCACGTTGTGAGGAGTCCTATTGCTGTCACGTGGAACGGTGGATTCTCCTCCTCCATTTGA 2901 0.4178 MATKFSLLLFLSFSLFFFLSFSVSSDAPRTYIVHVAQSQKPTLFAAHHHWYNSILRSLPPSAHPPTLLYTYSAAAEGFSARISPSQLPHLRRAPGVLAVEPDQIRQPHTTRTPRFLGLADSFGLWPNSDYAEDVIVGVLDTGIWPELGSFSDHNLSPVPATWKGTCQSSPDFPSSLCNRKIIGAKAFFRGYESYLERPIDESVESKSPRDTEGHGTHTSSTAAGAAVSNASLFHYAQGQARGMASKARIAAYKICWSLGWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAMDDAVSDGVHVISLSVGANGYAPQYFRDSIAIGAFGASRHGVLVSCSAGNSGPGPFTAVNIAPWILTVGASTIDREFPADVILGDGRVLNGVSLYYGDSLPDFNLPLVYAADCGGRYCYMGSLESSKVQGKIVVCDRGGNARVEKGSAVKLAGGLGMILANTEASGEELLADAHLLAATMVGETAGNKIKEYIKLSQYPTATIEFRGTVIGGSPSAPQVASFSSRGPNHLTPQILKPDVIAPGVNILAGWTGRVGPTDLDLDPRRVEFNIISGTSMSCPHASGIAALLRKAYPEWSPAAIKSALMTTAYNVDNSGGNIKDLASGKESDPFIHGAGHVDPNRALNPGLVYDLDTEDYLAFLCSIGYDASKIAVFTREPAGGDVCEGKVGRLGNPGDLNYPSFSVELGGGSGVVKYKRLVTNVGSEVDAVYTVKVSAPPGVAVSVSPSTLVFSGGSKTQAFEVAFTRVAYAGSQSFGSIEWTDGSHVVRSPIAVTWNGGFSSSI 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00413 966 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Cca11g00413 966 PRINTS Subtilisin serine protease family (S8) signature 736 752 IPR015500 -
Cca11g00413 966 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.6 461 961 - -
Cca11g00413 966 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.6 19 259 - -
Cca11g00413 966 SUPERFAMILY Subtilisin-like 9 257 IPR036852 GO:0004252|GO:0006508
Cca11g00413 966 Gene3D - 538 674 - -
Cca11g00413 966 Pfam Fibronectin type-III domain 859 956 IPR041469 -
Cca11g00413 966 ProSiteProfiles Serine proteases, subtilase domain profile. 113 807 - -
Cca11g00413 966 ProSitePatterns Serine proteases, subtilase family, serine active site. 737 747 IPR023828 -
Cca11g00413 966 CDD PA_subtilisin_like 544 667 - -
Cca11g00413 966 Pfam Peptidase inhibitor I9 30 106 IPR010259 -
Cca11g00413 966 SUPERFAMILY Subtilisin-like 460 811 IPR036852 GO:0004252|GO:0006508
Cca11g00413 966 MobiDBLite consensus disorder prediction 200 221 - -
Cca11g00413 966 Pfam Subtilase family 461 776 IPR000209 GO:0006508|GO:0008236
Cca11g00413 966 Pfam Subtilase family 132 257 IPR000209 GO:0006508|GO:0008236
Cca11g00413 966 Gene3D Peptidase S8/S53 domain 133 259 IPR036852 GO:0004252|GO:0006508
Cca11g00413 966 Gene3D Peptidase S8/S53 domain 460 820 IPR036852 GO:0004252|GO:0006508
Cca11g00413 966 Gene3D - 824 958 - -
Cca11g00413 966 SUPERFAMILY PA domain 566 631 IPR046450 -
Cca11g00413 966 Pfam PA domain 570 653 IPR003137 -
Cca11g00413 966 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 108 IPR037045 -
Cca11g00413 966 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 461 961 IPR045051 -
Cca11g00413 966 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 19 259 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00413 Cca-Chr11 5692218 5695118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00413 462 961 Subtilisin-like Serine Gene Family AT3G14067 68.577 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00413 - - gmx:100793990 884.404