Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00363 ATGTccgatcccgaaccaaaaacccgaacccgaaccTACAACCCTTACAAGGACCTCGACGTCCCAATCCAAAACCTCTACCACCTCCCAACTTCGCCGGAGTTCCTCTTCGTCGAGGAGGCCCGCCGCACGCGCCGCTCCTGGGGCGAGAACCTCACCTTCTACACCGGCTGCGGCTACCTCGCCGGAGCCCTTGGCGGCGCCACCGCAGGCCTCGTCGACGGCGTCAGGGCATTCGAGTCCGGCGACACCGCGAAGCTCCGAATCAACCGCGTGCTGAACGCGTCGGGGCACTCGGGTCGGGCCTGGGGGAACCGGGTCGGGATATTAGGGTTGCTCTACGCCGGAATCGAGAGCGGGATCGAGGCGGCGAGGGACGCCGACGACGTGTGGAACAGCGTGGCGGCGGGGCTCGGCACCGGCGCGCTGTACCGGGCGGCGAGAGGGGTGCGATCGGCGGCGGTGGCCGGAGCTTTGGGCGGCGTTCTCGTCGGAGTCGCCGTGGCGGGGAAGCAGGCGCTGAAACGATATGTGCCTATATGA 543 0.639 MSDPEPKTRTRTYNPYKDLDVPIQNLYHLPTSPEFLFVEEARRTRRSWGENLTFYTGCGYLAGALGGATAGLVDGVRAFESGDTAKLRINRVLNASGHSGRAWGNRVGILGLLYAGIESGIEAARDADDVWNSVAAGLGTGALYRAARGVRSAAVAGALGGVLVGVAVAGKQALKRYVPI 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00363 180 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM23 2 180 - -
Cca11g00363 180 Pfam Tim17/Tim22/Tim23/Pmp24 family 54 163 - -
Cca11g00363 180 PANTHER TIM23 2 180 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00363 Cca-Chr11 4756605 4757826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00363 2 176 Chloroplast and Mitochondria Gene Families AT1G17530 67.232 1.91e-78 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00363 K17794 - gmx:100813158 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00293 10 3170213 3174489 Cca11g00363 11 4756605 4757826 PCT