Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00310 ATGGCTTCAAGCTCAGGCAATGAAGGAGATTCAATGGAGGATTACGAGGCTCTGATTTCGACGACGGACGTTGAGCTTCTGAAGCGAGCGTGGCGCAACGAGAAGGCAGCACCCGAGGTTCTCCGATTCGAATTCCAGTTGATTTCCCGCCTCAGAGAACAGATTGAACTGATGGAAGAAACCATCCAAGATAAATCCACCGCCGCAACGGACCCCCTTTCGCTCTCTCTCTATCAGATGGACTTGGACAGAACCCTCTTTCTCCTCCGATCATATCTCCGGATCCGCATCCAAAAGATTGAAAAGTACATGTTCCACATCCGAAAGACTAATGAACTTTGGAACAGGCTATCTAAAGACGAGAAAGAGTTCACCAATGCGTGTATAGAAGACCTAAAGCAACATCTGGAGGAGAGTGTTCTGTCAAAGTTGCCTGAAAATTATCAGTCTGTTCTTAAGCAATCTGTAACAAGTGGAGAGGATGATATGGTCCCAGAACCACAACTAGACACATTTGTTTTGTGTAGAAGTAAAGAGTATCTCACGGGAATTCAACTCGAAGATGGACCTGTTGATGACAGGCAATTCCCTTATTCTTGCATGAATTTATTCTGCTCTGTTTAG 624 0.4519 MASSSGNEGDSMEDYEALISTTDVELLKRAWRNEKAAPEVLRFEFQLISRLREQIELMEETIQDKSTAATDPLSLSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHIRKTNELWNRLSKDEKEFTNACIEDLKQHLEESVLSKLPENYQSVLKQSVTSGEDDMVPEPQLDTFVLCRSKEYLTGIQLEDGPVDDRQFPYSCMNLFCSV 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00310 207 SUPERFAMILY GINS helical bundle-like 20 152 IPR036224 -
Cca11g00310 207 PANTHER SLD5 PROTEIN 10 193 IPR008591 GO:0006261
Cca11g00310 207 CDD GINS_A_Sld5 23 141 IPR038749 -
Cca11g00310 207 Gene3D - 8 202 - -
Cca11g00310 207 Coils Coil 48 68 - -
Cca11g00310 207 PIRSF GINS_Sld5 1 205 IPR008591 GO:0006261
Cca11g00310 207 Pfam GINS complex protein 63 122 IPR021151 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00310 1 172 Core DNA Replication Machinery Family AT5G49010 60.465 2.26e-65 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00310 K10735 - gmx:100814216 302.367