Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00277 ATGGTGAACATTGGGACACTTGTTCTACTCTTTTCATTTTTCCTCCTGAGATGTGGGCATGCACAAGACACCCTTGTGCCAGCTATCATAACATTTGGTGACTCCGCAGTGGATGTAGGGAATAATGACTATCTCCCCACCCTTTTCAAGGCTGATTACCCTCCTTATGGGAGGGACTTTGTTAACCACCAACCTACTGGGAGGTTTTGCAATGGCAAATTAGCTACTGATATTACTGCCGACACATTGGGTTTCAAGACTTATGCTCCTGCATATCTTAGCCCTCAGGCATCAGGGAAAAACCTCCTTATTGGAGCAAACTTTGCTTCAGCTGCATCTGGTTATGATCAAAATGCTGCCGTTTTGAATCATGCTATCCCTTTGTCCCAACAGTTAAGTTATTTCAAGGAATACCAAGGCAAACTGGAAAAAGTTGCTGGCAGTAAAAAAGCAGCCTCTATTATCAAGGATGCATTGTACTTGCTCAGTGCTGGAAGTAGTGACTTTGTGCAAAACTATTACGTCAATCCTTGGATCAACAAAGCCGTCACTCCTGATCAGTATGGGTCCTACTTAGTGGGTGAATTTTCAAGCTTTGTTAAGGACTTGTATGGATTGGGAGCAAGGAGAATTGGAGTGACTTCACTCCCACCATTGGGTTGCCTACCTGCTGCAAGGACTTTATTTGGCTTCCATGAGAATGGTTGTGTCTCAAGAATCAACACTGATGCCCAAGGATTTAACAAGAAGATCAACTCAGCTGCAGCAAATCTTCAAAAGCAACTTCCCGGTCTTAAGATTGCAGTTTTTGACATTTACAAGCCTCTCTATGACCTTGTTCAATCCCCTTCAAAATTCGGTTTTTCTGAGGCAAACAGAGGTTGCTGTGGTACCGGGACTGTGGAAACAACATCCTTGTTGTGTAATCCAAAGTCACCAGGAACTTGTTCTAATGCCACGCAATATGTGTTTTGGGACAGTGTGCATCCTTCGGAAGCTGCTAACCAAGTTCTAGCAGATTCATTAATTCTACAAGGCATAGCTCTTATCACATAA 1056 0.4328 MVNIGTLVLLFSFFLLRCGHAQDTLVPAIITFGDSAVDVGNNDYLPTLFKADYPPYGRDFVNHQPTGRFCNGKLATDITADTLGFKTYAPAYLSPQASGKNLLIGANFASAASGYDQNAAVLNHAIPLSQQLSYFKEYQGKLEKVAGSKKAASIIKDALYLLSAGSSDFVQNYYVNPWINKAVTPDQYGSYLVGEFSSFVKDLYGLGARRIGVTSLPPLGCLPAARTLFGFHENGCVSRINTDAQGFNKKINSAAANLQKQLPGLKIAVFDIYKPLYDLVQSPSKFGFSEANRGCCGTGTVETTSLLCNPKSPGTCSNATQYVFWDSVHPSEAANQVLADSLILQGIALIT 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00277 351 SUPERFAMILY SGNH hydrolase 29 342 - -
Cca11g00277 351 CDD SGNH_plant_lipase_like 27 343 IPR035669 -
Cca11g00277 351 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 6 350 - -
Cca11g00277 351 PANTHER GDSL ESTERASE/LIPASE EXL3 6 350 - -
Cca11g00277 351 Pfam GDSL-like Lipase/Acylhydrolase 29 341 IPR001087 GO:0016788
Cca11g00277 351 Gene3D SGNH hydrolase 18 346 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00277 Cca-Chr11 3457405 3459534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00277 6 343 Pollen Coat Proteome AT1G75910 35.088 4.16e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00277 - - gmx:100815273 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00277 11 3457405 3459534 Cca11g00277 11 3457405 3459534 ECH
Cca10g00228 10 2421292 2423162 Cca11g00277 11 3457405 3459534 PCT