Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00249 ATGGAAGCGCCGGAATACTTCGTCGGAGGCTATTTTGGCGCCGGAGGACTCGACCAATTCTCGCCTCCGGAGAAGCGCCACGCCGACCAGAAGCCTGGGGAGCCTTTCGCCATTGACGACCTCCTCGACTTCTCCCACGCCGACGCCATTATGTCCGACGGTTTCTTCGACAATGTCGCCGCCAACTCCACCGACTCCTCCACCGTCACCGCCGTCGACAGCTGCAACTCCTCAGTTTCCGGCAGCGACAACCGCTTCACCGCCGCCATTGTCCCTCGCGGATTCACCGGCGATCCTCAATTCTCCGGAGAGCTCTGCGTTCCGTACGACGACATGGCGGAACTGGAATGGCTCTCGAACTTCGTCGAAGACTCGTTCTCCGCCGAGGAGGAGCTGAAGACGCTGCAGCTACTCTCCGGCGCTGCCGCCGCCGGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGTTCGCGTCCGACGACGGCGGTCGGAACGCGCCGTTTCTCCACTCGGAGACGCCGCTCCCGGGGAAGGCTCGAAGCAAGCGGTCACGCGCGGCGCCGGGGGACTGGTCGACGCGCCTGCTCCACCTGGTGGTGCCGGAGCAGGAGAAggcggcagcggcggcggcgAAGAAGAGAGAGGGAGCGAATGCAGAGTGTTCGGGACGGAAATGCCTGCACTGCGGCGCGGAGAAGACGCCGCAATGGCGGACGGGACCGATGGGACCGAAGACGCTGTGCAATGCGTGCGGCGTGAGGTTCAAGTCCGGGCGGTTGGTGCCGGAGTACCGGCCGGCGGCGAGCCCGACGTTCGTGTCGACGAAGCATTCGAATTCGCATCGTAA 993 0.5196 MEAPEYFVGGYFGAGGLDQFSPPEKRHADQKPGEPFAIDDLLDFSHADAIMSDGFFDNVAANSTDSSTVTAVDSCNSSVSGSDNRFTAAIVPRGFTGDPQFSGELCVPYDDMAELEWLSNFVEDSFSAEEELKTLQLLSGAAAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRVRRRRSERAVSPLGDAAPGEGSKQAVTRGAGGLVDAPAPPGGAGAGEGGSGGGEEERGSECRVFGTEMPALRRGEDAAMADGTDGTEDAVQCVRREVQVRAVGAGVPAGGEPDVRVDEAFEFAS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00249 330 PANTHER GATA TRANSCRIPTION FACTOR 1 140 - -
Cca11g00249 330 MobiDBLite consensus disorder prediction 206 293 - -
Cca11g00249 330 PANTHER GATA TRANSCRIPTION FACTOR 9 1 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00249 Cca-Chr11 3024480 3025588 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00249 36 140 C2C2-Gata Transcription Factor Family AT4G32890 44.762 1.39e-13 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00249 - - gmx:100776605 248.054
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00249 11 3024480 3025588 Cca11g00249 11 3024480 3025588 ECH