Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00246 ATGGCATCCCTTTTGAGCATCCTCTGTGTTGCTTGGATCGTTGTCTTGGCTGTGATGGATACCCCGGTTGAAGGTGCTAAGCAATTCAAAGTGGGTTGGCATGAACCTAATCCCAACGACACTGCATTTTATAATCAATGGGCTGCATGGAACAGGTTTCAAGTTGGTGACTCTTTGGTTTTTGAGTACCAGAATGACACAGTTTTGAATGTGGAGAAATGGGAATACTTTCATTGTGACTCAAACGATCCCATCAATACATTTGATGATGGGAACAGCACAGTGATTCTTGATAGCCCTGGAGCATTCTACTTCATCAGTGGAACTGAAGATCATTGCCAGAATGGACAAAAGTTGATTGTAGAGGTGATGTCTCCACACACAATTCCAAACTCTCCACCACCTATTTCAATTCCACCACAAGGTTCCTCACCATTGTCTCCTCCAACTTCTCATAGCTCAGGGGTTTCTTCCTCCATTATGGCTCTTTTCACCACATTTCTAGTACTTGTGCTGCTTTTAGCATCTTGA 531 0.4331 MASLLSILCVAWIVVLAVMDTPVEGAKQFKVGWHEPNPNDTAFYNQWAAWNRFQVGDSLVFEYQNDTVLNVEKWEYFHCDSNDPINTFDDGNSTVILDSPGAFYFISGTEDHCQNGQKLIVEVMSPHTIPNSPPPISIPPQGSSPLSPPTSHSSGVSSSIMALFTTFLVLVLLLAS 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00246 176 PANTHER EARLY NODULIN-LIKE PROTEIN 2 10 172 - -
Cca11g00246 176 MobiDBLite consensus disorder prediction 130 146 - -
Cca11g00246 176 SUPERFAMILY Cupredoxins 26 124 IPR008972 -
Cca11g00246 176 MobiDBLite consensus disorder prediction 130 151 - -
Cca11g00246 176 PANTHER BLUE COPPER PROTEIN 10 172 IPR039391 GO:0009055
Cca11g00246 176 Pfam Plastocyanin-like domain 40 117 IPR003245 GO:0009055
Cca11g00246 176 CDD OsENODL1_like 27 124 IPR041846 -
Cca11g00246 176 Gene3D - 25 128 IPR008972 -
Cca11g00246 176 ProSiteProfiles Phytocyanin domain profile. 27 125 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00246 Cca-Chr11 3006714 3007647 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00246 2 143 Phytocyanin Superfamily AT1G79800 47.260 1.04e-42 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00246 - - vun:114166188 195.667
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00246 11 3006714 3007647 Cca11g00246 11 3006714 3007647 ECH