Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00201 ATGAGGGTCCAGATTGCGCTCGATACTGCTAGGGGCCTTGAATACATACATGAGCACACAAAAACTCATTATGTCCACCGAGATATCAAGACAAGTAACATTTTACTTGATGCTTCCTTTAGAGCAAAGATTTCAGATTTTGGATTAGCAAAACTTGTTGGGAAAGCAAATGAGGGAGAAATTTCAACAACCAAAGTTGTTGGTACATATGGATATCTTGCTCCAGAATATTTGAGTGACGATATAAAACTTGAGAATCCAGTAGAGTTGATTGGCTATGCAGCTAGTCATGAGGAGCTTTTCCTAGTTTATGAATATGCTCAGAAGGGTTCACTTAGAAGCCATTTGCATGATCCACAAAATAAGGCATTTTGCCTGGTTATTGTGATGAGATATACCTTGTGA 405 0.3852 MRVQIALDTARGLEYIHEHTKTHYVHRDIKTSNILLDASFRAKISDFGLAKLVGKANEGEISTTKVVGTYGYLAPEYLSDDIKLENPVELIGYAASHEELFLVYEYAQKGSLRSHLHDPQNKAFCLVIVMRYTL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00201 134 SUPERFAMILY Protein kinase-like (PK-like) 85 120 IPR011009 -
Cca11g00201 134 Pfam Protein kinase domain 4 80 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00201 134 Gene3D Transferase(Phosphotransferase) domain 1 84 132 - -
Cca11g00201 134 ProSitePatterns Serine/Threonine protein kinases active-site signature. 24 36 IPR008271 GO:0004672|GO:0006468
Cca11g00201 134 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 86 124 IPR044812 GO:0019199|GO:0045087
Cca11g00201 134 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 80 IPR044812 GO:0019199|GO:0045087
Cca11g00201 134 SUPERFAMILY Protein kinase-like (PK-like) 2 81 IPR011009 -
Cca11g00201 134 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 86 124 - -
Cca11g00201 134 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 3 1 80 - -
Cca11g00201 134 Gene3D Transferase(Phosphotransferase) domain 1 1 83 - -
Cca11g00201 134 ProSiteProfiles Protein kinase domain profile. 1 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00201 Cca-Chr11 2494231 2495582 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00201 1 82 Receptor kinase-like Gene Family AT1G51940 87.805 1.54e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Cca11g00201 Pkinase 9.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00201 - - gmx:100796989 160.229