Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00180 ATGGTGCAATGCTTGAGTCGTAGTGTTCATCCTAACTGGTCGTGGTACAATCGTGATCCTCTTCGCTATGTGGATTGCTTGGCTTGCCCCCTTCAAATTCTACCTCAATCTCCCATGCACGCGAAGAGCCTTGCGGTTCTCGAGAATTTGATGCTCCGAAGAAAGATGGTTGAAAGTGCCAAGGAAAGCATAACAAAGAAAGCTAGTAACTTTGAAATCTATGGGAAGTCGCAAGCAGTGTTTATAGAAATGGATAGCAGTACATCAACTTTTGTGGGAAAAGAACTGAAGGACTTGAAAGATGTTGTCTTAAAAGGAGAAGACAAAGGAGACTACAAGGATACCTTTGACCCTGAGAAGCACATTGATGCATATCTGCATGTTAGAGTAAATGAGCAAAGAGTTGTTGGAGGGGGATCATGCTCCCTTTGTGGAGTCAATACCGATCGGAAACATAGCCTTCCTTTGTTGTACATCCTACCCAAGCTGTTCAATCCTCACCATCTAAAGGAACTGGATGGAGCTGAATATGAGGAAACTGTGGGTACTCCAAGACTTTCTTTCTCTTTCAGGATGGAATCACCAAGTTTTAGATCAATGGAAGTGTGTGATAGTGAAATATTAGATAAGTTAACTACTAGCTTTAATGAGGAAAGACATGGCCAGAACAAAAGCAAAAGATATCAATCAAGGTTGTGTTTTGCGTTGTATGGTTTGGTGCGTCTCAATTTGAAAACTGAAGACTGTGCTTTGTACTATATACAATTAGCATATGAGATTTCATAG 786 0.4097 MVQCLSRSVHPNWSWYNRDPLRYVDCLACPLQILPQSPMHAKSLAVLENLMLRRKMVESAKESITKKASNFEIYGKSQAVFIEMDSSTSTFVGKELKDLKDVVLKGEDKGDYKDTFDPEKHIDAYLHVRVNEQRVVGGGSCSLCGVNTDRKHSLPLLYILPKLFNPHHLKELDGAEYEETVGTPRLSFSFRMESPSFRSMEVCDSEILDKLTTSFNEERHGQNKSKRYQSRLCFALYGLVRLNLKTEDCALYYIQLAYEIS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00180 261 PANTHER ANION EXCHANGE PROTEIN 32 136 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cca11g00180 261 PANTHER ANION EXCHANGE PROTEIN 158 220 IPR003020 GO:0005452|GO:0006820|GO:0016020
Cca11g00180 261 PANTHER BORON TRANSPORTER 4-RELATED 158 220 - -
Cca11g00180 261 PANTHER BORON TRANSPORTER 4-RELATED 32 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00180 Cca-Chr11 2181845 2183845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00180 158 217 Antiporters AT1G15460 62.903 1.82e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00180 K24194 - ccaj:114916533 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00180 11 2181845 2183845 Cca10g00129 10 1264744 1291354 ECH
Cca11g00180 11 2181845 2183845 Cca11g00180 11 2181845 2183845 ECH