Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00154 atggtcgTCATGGGTGCCACCAACTCCAACAAGTCCCACCACTCCACCAACTTCATCACCCTATTCCCTTTCTCCAAAATCATCAACTCCAACGAAATGCAAGTCTATTGCGACCTTGACATAACCACCAACAAGATCCCTCATTCCCACCACCACAGCGTTCCCCACCTATGGCAACTTCTCCCCATCGATTTTCGTCATTATGTCGTCGACCTCATCTCCAACATCACTGCCTTGGGGCAACCTTCCCCACCTCATATATGTCTCCATCATCACTAG 279 0.4803 MVVMGATNSNKSHHSTNFITLFPFSKIINSNEMQVYCDLDITTNKIPHSHHHSVPHLWQLLPIDFRHYVVDLISNITALGQPSPPHICLHHH 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00154 92 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 4-RELATED 1 77 - -
Cca11g00154 92 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 1 77 IPR039657 -
Cca11g00154 92 Gene3D - 1 57 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00154 Cca-Chr11 1905310 1905588 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00154 3 78 C2H2 Transcription Factor Family AT2G27760 34.524 3.40e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00154 K10760 - gmx:100813761 82.0333