Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00142 ATGGCAACGGCGACATACCCTCCACCGCCACCTTTTTACAGACTTTACAAAGATTACAAGCAAGACCCTAAGTCTGCTCCTGAGCCTCCACCTCCTATTGAAGGGACTTACGTTTGCTTTGGAGGCACTTACACTACTAGTGATGTTCTGCCAAGCTTGGAAGAACAAGGGGTGCGCCAGCTGTATTCCAAGGGGCCTAATGTTGATTTCAAGAAGGAGTTGAGATCACTTAATGGAGAGTTGCAATTACACGTCTTGGAGCTTGCTGATATTCTTATCGAGAGACCTTCACAGTATGCAAGGAGAGTTGAAGAAATTTCAACTATATTCAAGAACTTACATCACCTTTTAAATTCATTGCGTCCTCATCAGGCGAGAGCAACATTGATTCACATTTTGGAACTTCAGATACAGCGCCGTAAACAAGCAGTGGAGGACATAAAGAGGAGGAGAGAAGAAGCTCGGAGGCTCCTTAACGAGTCTTTGGCGACACTTGATGGTCATTAG 507 0.4497 MATATYPPPPPFYRLYKDYKQDPKSAPEPPPPIEGTYVCFGGTYTTSDVLPSLEEQGVRQLYSKGPNVDFKKELRSLNGELQLHVLELADILIERPSQYARRVEEISTIFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEARRLLNESLATLDGH 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00142 168 MobiDBLite consensus disorder prediction 1 32 - -
Cca11g00142 168 Coils Coil 130 164 - -
Cca11g00142 168 Gene3D - 60 159 IPR044888 -
Cca11g00142 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Cca11g00142 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 168 IPR009244 GO:0003712|GO:0006357|GO:0016592
Cca11g00142 168 SUPERFAMILY Mediator hinge subcomplex-like 66 159 IPR037212 GO:0016592
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Cca11g00142 Med7 1.1e-43 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00142 K15148 - gmx:100792250 298.516