Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00133 ATGGGTGCTGCTCTGCTGTCGGAGCTCGCGACGGAGATAGTGGTTCCGGCGTGCGCCGTCATCGGGATTGCGTTCTCGCTGGTGCAGTGGGTCCTTGTGTCGCGCGTCAAGCTCACGCCCGACCGCCACGGAACGACGTCGTCGCCGCGCAACAACAAGAACGGCTACGGCGACTACCTCATCGAGGAAGAGGAAGGCATCAACGACCACAGCGTCGTCGTCAAATGCGCTGAGATACAGAGCGCCATTTCCGAAGGTGCAACATCCTTTCTTTTCACTGAATATCAATATGTGGGGATCTTCATGGTTGCTTTTGCAATACTGATCTTCCTTTTCCTGGGCTCTGTGGAAAGCTTCAGTACTAAGAGCCAGCCCTGCACGTATGATAAGAGCAAGCTATGCAAGCCTGCCCTTGCAACTGCATTGTTTAGCACTGTATCTTTCTTGCTTGGTGCTATAACTTCAGTACTATCTGGTTTCCTTGGGATGAAAATTGCAACCTATGCCAATGCAAGGACAACCTTGGAAGCGAGAAAGGGAGTTGGGAAGGCTTTTATTACTGCATTTAGGTCCGGTGCAGTGATGGGTTTCCTTCTTGCAGCAAATGGTCTTTTGGTGCTCTACATTACCATTAACCTCTTCAAGCTATATTATGGTGATGATTGGGAAGGTCTTTTTGAGGCTATAACTGGTTATGGTTTGGGTGGATCTTCTATGGCTCTGTTTGGGAGAGTCGGTGGTGGTATCTATACCAAGGCTGCTGATGTTGGTGCTGATCTGGTAGGAAAAGTTGAAAGAAATATCCCAGAGGATGATCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGATAATGTCGGAGATATTGCTGGGATGGGTTCTGATCTTTTTGGATCATATGCTGAATCATCTTGTGCTGCCTTAGTTGTTGCCTCCATTTCTTCATTTGGAATCAATCACGAGTTCACTGCAATGTTATATCCTCTACTCATCAGTTCTGTTGGCATTATTGTGTGTTTGATTACTACTCTCTTTGCAACTGATTTCTTTGAGATCAAGGCTGTCAAGGAAATTGAACCAGCATTGAAAAAGCAGCTTATCATTTCTACAGTACTCATGACTGTTGGAATTGCAATTATTAGTTGGCTTGCTCTGCCAACATCCTTCACAATTTTCAACTTTGGCGTTCAGAAGGAAGTAAAGAGCTGGCAGCTGTTCCTCTGTGTGGGTGTTGGTCTATGGGCTGGACTTATTATTGGGTTTGTTACCGAATATTATACAAGCAATGCTTACAGCCCTGTACAAGATGTTGCTGATTCCTGCCGGACTGGAGCTGCAACCAATGTCATCTTTGGTCTTGCTCTGGGATACAAGTCTGTGATTATTCCTATTTTTGCCATTGCAATCAGCATTTTTGTGAGTTTCACTTTTGCTGCGATGTATGGTATTGCTGTGGCTGCCCTTGGAATGCTGAGCACCATCGCAACAGGGTTGGCTATTGATGCCTATGGACCTATTAGTGATAATGCAGGAGGTATTGCTGAGATGGCAGGCATGAGCCATCGCATTCGTGAGAGAACTGACGCCCTTGATGCTGCTGGAAACACTACTGCTGCCATAGGCAAGGGATTTGCTATTGGGTCTGCTGCTCTGGTGTCCTTGGCCCTATTTGGTGCATTTGTGAGCAGAGCAGGAATTTCGACTGTTGATGTCTTGACTCCCAAGGTCTTTATTGGACTCATAGTTGGTGCCATGCTTCCTTACTGGTTTTCTGCCATGACCATGAAGAGTGTTGGAAGTGCAGCTTTGAAGATGGTTGAGGAGGTTCGTAGGCAATTCAACACCATTCCAGGACTCATGGAGGGTCATGCCAAGCCTGATTATGCTACATGCGTCAAGATTTCTACTGATGCATCCATCAAGGAGATGATTCCTCCAGGCGCCCTTGTCATGCTCACACCACTCATCGTCGGTGTTTTCTTTGGTGTGGAAACACTTTCAGGTGTTCTTGCAGGCTCTCTAGTCTCTGGGGTGCAGATTGCAATATCAGCATCCAACACTGGCGGTGCCTGGGATAATGCCAAGAAGTACATCGAGGCTGGTGCATCTGAGCATGCAAGGACCTTGGGCCCGAAGGGATCTGAACCGCACAAGGCAGCTGTTATTGGCGATACCATTGGAGACCCTCTTAAAGATACTTCAGGCCCTTCTCTCAACATCCTCATTAAGCTCATGGCAGTTGAGTCACTTGTCTTCGCTCCATTTTTCGCCACTCATGGCGGCTTGCTTTTCAAGATCTTTTGA 2307 0.472 MGAALLSELATEIVVPACAVIGIAFSLVQWVLVSRVKLTPDRHGTTSSPRNNKNGYGDYLIEEEEGINDHSVVVKCAEIQSAISEGATSFLFTEYQYVGIFMVAFAILIFLFLGSVESFSTKSQPCTYDKSKLCKPALATALFSTVSFLLGAITSVLSGFLGMKIATYANARTTLEARKGVGKAFITAFRSGAVMGFLLAANGLLVLYITINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGINHEFTAMLYPLLISSVGIIVCLITTLFATDFFEIKAVKEIEPALKKQLIISTVLMTVGIAIISWLALPTSFTIFNFGVQKEVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAISIFVSFTFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAGISTVDVLTPKVFIGLIVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGLMEGHAKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGVFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSEPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00133 768 Pfam Inorganic H+ pyrophosphatase 45 753 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cca11g00133 768 PIRSF H+-PPtase 8 766 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cca11g00133 768 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 10 763 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cca11g00133 768 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 758 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cca11g00133 768 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 1 768 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Cca11g00133 768 PANTHER PYROPHOSPHATE-ENERGIZED VACUOLAR MEMBRANE PROTON PUMP-LIKE 1 768 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00133 Cca-Chr11 1626689 1631544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00133 4 631 Primary Pumps ATPases AT1G15690 89.348 0.0 1135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00133 K23025 - gmx:100803691 1456.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00133 11 1626689 1631544 Cca11g00133 11 1626689 1631544 ECH