Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00097 ATGGATAGCGAGGAAGTACCATCAGTACCTTCCACTCCTGCAACACCAGGGACTCCTGGTGCTCCTCTTTTTGGTGGCCTCAAGTTTGACAAAACTAATGGTGTTGTTAGGAAATCATCCTTCCTCAAAAGTTGCAAATGTTTCAGTGTTGAAGAATGGACCTTAGAAGATGGAGCCATGCCTAGAGTCTCTTGCTCTTTACCAGCCCCTCATATCCCTCTAGCAAAAAAGGTTGGAGCTGAGTTTATTGGCACGTTCATTCTCATGTTTGCAGCAATAGGCACTGCTATTGTGAACCAAAAGACACATGGCTCAGAGACTCTGATTGGTTGTGCTGCCGCTAATGGACTTGCCGTCATGATCATAATATTTTCCACCGGACACATCTCTGGGGCTCATCTAAACCCCGCTGTCACCATTTCATTCGCTGCATTAAAGCACTTCCCGTGGAAAAATGTGCCGGTGTATATTGGTACACAAGTTTTGGCATCAATAAGTGCTGCATTTGCTCTGAAAGTGGTTTTTCATCCGTTCATGAGCGGTGGAGTGACGGTCCCTTCGGTAGGATATGGCCAAGCATTCGCCACAGAGTTCATTGTCAGCTTTATTCTTATGTTCGTTGTCACTGCAGTGGCCACCGACACAAGAGCTGTGGGAGAGCTCGCGGGAATTGCAGTGGGAGCCACTGTCATGCTCAACATACTCATAGCCGGGCCAGCAACTGGAAGTTCAATGAACCCTGTTAGAACACTGGGTCCAGCAATTGCTGCAAACAACTACAAGGGTATATGGCTCTATCTCCTTGCTCCCATACTTGGAACTCTATGTGGGGCAGGTGCCTACACTGTGGTCAAGCTCCCTCAAGAAGATACAAAGCCACCTTCTGCTCCTGCTGGCAGCTTCAGAAGGTGA 912 0.4803 MDSEEVPSVPSTPATPGTPGAPLFGGLKFDKTNGVVRKSSFLKSCKCFSVEEWTLEDGAMPRVSCSLPAPHIPLAKKVGAEFIGTFILMFAAIGTAIVNQKTHGSETLIGCAAANGLAVMIIIFSTGHISGAHLNPAVTISFAALKHFPWKNVPVYIGTQVLASISAAFALKVVFHPFMSGGVTVPSVGYGQAFATEFIVSFILMFVVTAVATDTRAVGELAGIAVGATVMLNILIAGPATGSSMNPVRTLGPAIAANNYKGIWLYLLAPILGTLCGAGAYTVVKLPQEDTKPPSAPAGSFRR 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00097 303 PANTHER BNAA02G36290D PROTEIN 3 291 - -
Cca11g00097 303 SUPERFAMILY Aquaporin-like 71 291 IPR023271 -
Cca11g00097 303 Gene3D Glycerol uptake facilitator protein. 69 296 IPR023271 -
Cca11g00097 303 PANTHER AQUAPORIN NIP2-1 3 291 IPR034294 -
Cca11g00097 303 MobiDBLite consensus disorder prediction 1 22 - -
Cca11g00097 303 PRINTS Major intrinsic protein family signature 76 95 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca11g00097 303 PRINTS Major intrinsic protein family signature 115 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca11g00097 303 PRINTS Major intrinsic protein family signature 152 171 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca11g00097 303 PRINTS Major intrinsic protein family signature 196 214 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca11g00097 303 PRINTS Major intrinsic protein family signature 227 249 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca11g00097 303 PRINTS Major intrinsic protein family signature 264 284 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca11g00097 303 Pfam Major intrinsic protein 73 281 IPR000425 GO:0015267|GO:0016020|GO:0055085
Cca11g00097 303 ProSitePatterns MIP family signature. 133 141 IPR022357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00097 Cca-Chr11 1096245 1100090 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00097 1 303 Major Intrinsic Protein MIP AT1G80760 75.244 3.76e-162 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00097 K09874 - gmx:100798410 530.406