Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00084 ATGTCGGGGCAAACGCAGCGTCTGAACGTGGTCCCCACGGTCACCATGCTGGGAGTGGTGAAGGCGCGTCTCGTGGGGGCCACGCGCGGCCACGCGCTCCTCAAGAAGAAGAGCGACGCGCTCACCGTGCAGTTCCGCCAGATCCTCAAGAAGATCGTCTCCACCAAGGAGTCCATGGGCGACATAATGAAAACGTCGTCGTTCGCGCTCACCGAGGCCAAGTACGTCGCCGGCGACAACATCAAGCACGTCGTCCTCGAGAACGTCCGCGAGGCCTCCCTCCGCGTCCGCTCCCGCCAGGAGAACGTCGCCGGCGTCAAGCTCCCCAAGTTCGACTACACCTCCGACGCCGACGCCGCCAAGAGCGACCTCACCGGCCTCGCCCGCGGCGGCCAGCAGGTCCAGCAGTGCCGCGCCGCCTACGTGAAGGCCATCGAGGTCCTCGTGGAGCTCGCCTCTCTCCAGACCTCGTTTCTCACTCTGGACGAGGCCATCAAGACCACCAATCGTAGGGTTAACGCGCTGGAGAACGTGGTTAAGCCTCGGTTGGAGAATACCATTAGTTACATCAAGGGCGAATTGGATGAGTTGGAGAGGGAGGATTTCTTCAGGCTCAAGAAGATTCAGGGCTACAAGAAGAGGGAGATCGAGAAgcagttgcagttgcagttgcagttgcagatgcagtCCTCCTCCAAGTTGCCTGTCAACATAGGGGTTTCCTTCAATTCCTCTCACAACTTGTTGGCTGTGGCTGACAAAGACGACGATATTATTTTCTGA 783 0.5683 MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVSTKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVREASLRVRSRQENVAGVKLPKFDYTSDADAAKSDLTGLARGGQQVQQCRAAYVKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQLQLQLQLQMQSSSKLPVNIGVSFNSSHNLLAVADKDDDIIF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00084 260 Gene3D - 1 199 - -
Cca11g00084 260 PANTHER V-TYPE PROTON ATPASE SUBUNIT D-RELATED 1 260 - -
Cca11g00084 260 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 260 IPR002699 GO:0046961
Cca11g00084 260 Coils Coil 180 200 - -
Cca11g00084 260 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Cca11g00084 260 TIGRFAM V_ATPase_subD: V-type ATPase, D subunit 9 213 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00084 Cca-Chr11 928241 929487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00084 1 260 Primary Pumps ATPases(2) AT3G58730 76.336 2.07e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00084 K02149 - gmx:100808847 443.351