Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00072 ATGGCAAGGGCATGCTCATGGGAACTGACATGTGCCCTCCTTCTGCTCCTCTGCGCCGTTGCCACCGCCACCGACCACATTGTGGGAGCCAATCGTGGGTGGAATCCTGGCATTAACTACACTCTTTGGGCCAACAACCACACTTTCTATGTCGGCGACCTTATCTCATTCAGGTACCAAAAGAACCAATACAATGTGTTTGAGGTGAACCAAACAGGGTATGACAACTGCACCACAGAAGGGGCAGTGGGGAATTGGAGTAGTGGCAAGGATTTCATACCCCTTAACAAGGCCAAGAGATACTACTTCATTTGTGGCAATGGCCAGTGCTTCAATGGGATGAAGGTCTCAGTTATTGTCCATCCTCTTCCTTCACCTCCTACCTCTGCTGAACATTCAACTCCAAAGTCTGCATCTCCTGTGCTCTTCAAAAGGAGTTTTCACTCACTAATGCTGTCTTTTGTGTTAGCTTGGTTTGGATGTGTTTGGATTTAG 495 0.4808 MARACSWELTCALLLLLCAVATATDHIVGANRGWNPGINYTLWANNHTFYVGDLISFRYQKNQYNVFEVNQTGYDNCTTEGAVGNWSSGKDFIPLNKAKRYYFICGNGQCFNGMKVSVIVHPLPSPPTSAEHSTPKSASPVLFKRSFHSLMLSFVLAWFGCVWI 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00072 164 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Cca11g00072 164 Gene3D - 22 123 IPR008972 -
Cca11g00072 164 PANTHER BLUE COPPER PROTEIN 12 154 IPR039391 GO:0009055
Cca11g00072 164 PANTHER OS09G0557900 PROTEIN 12 154 - -
Cca11g00072 164 SUPERFAMILY Cupredoxins 23 121 IPR008972 -
Cca11g00072 164 ProSiteProfiles Phytocyanin domain profile. 24 122 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00072 Cca-Chr11 801340 802649 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00072 1 163 Phytocyanin Superfamily AT5G15350 38.690 4.40e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00072 - - gmx:100305555 286.189
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00072 11 801340 802649 Cca11g00072 11 801340 802649 ECH