Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00069 ATGGGGATATACCTCAGCACTCCCAAAACAGACAAGGCCTCTGAAGATGGGGAGAACGACAGGCTTCGCTTCGGTTTGTCTTCCATGCAGGGCTGGCGTGCTTCCATGGAAGATGCTCATGCAGCTCATCCATATTTAGACGAGTCTACATCTTACTTTGGTGTTTATGATGGTCATGGAGGCAAAGCTGTTTCAAAATTCTGTTCCAAGTATCTACACCAGCAGGTGCTTAAGAGTGAATCTTACCAAGCTGGTGATATAGGCACATCTTTACACAAATCTTTCCTCAGAATGGATGAGATGATGCGTGGACAAAGAGGTTGGAGAGAATTAGCAGTCTTGGGAGATAAAATAGAAAAGTTGTCTGGTATGCTAGAGGGTTTTATATGGTCTCCCAAGAGTGGTGAAGCCAATGACCGCATCGATGATTGGGCTTTTGAGGAGGGACCCCATTCCGATTTTGGTGGACCAAACTCTGGAAGCACAGCTTGTGTGGCTGTCATCCGAGGAAAAAAACTTGTTGTTGCTAATGCTGGAGATTCTAGATGTGTCTTATCAAGGAAAGGCCAGGCACACAATTTGTCTAAAGATCACAAGCCTGATCTGGAGGCTGAGAAAGACAGGATTCTAAAAGCTGGTGGTTTCATCCAAGTTGGACGGGTCAATGGAAGTTTGAACTTGGCTAGAGCAATTGGAGATATGGAATTCAAGCAGAATAAGTATTTGCCTGCCGAAAAGCAGATTGTGACAGCTGAACCGGACATAACTTCAGTTGAGCTTTGTGATGATGATGAGTTTCTTGTAATAGCTTGTGATGGAATATGGGATTGTATGTCTAGCCAACAGCTTGTGGACTTTATACATCATCAATTAGAGACGGAGAATAAACTTTCTGCGGTTTGTGAGAAAGTATTTGATAGGTGCTTGGCACCGACAGCTGGAGGTGAAGGTTGTGATAACATGACCATGATATTGATTCAGTTCAAAAAACCTTCCAGCCCAGATGCTTCAGTTGCGAACCAGCCCCAATCGTCTGCCCAATCATCTGCCCAATCTTCTGCGCAGCCCCAATCATCTGAAGCTGATAGAAGTTCAGAGAAAAGAGAATCAAAGTGA 1116 0.4435 MGIYLSTPKTDKASEDGENDRLRFGLSSMQGWRASMEDAHAAHPYLDESTSYFGVYDGHGGKAVSKFCSKYLHQQVLKSESYQAGDIGTSLHKSFLRMDEMMRGQRGWRELAVLGDKIEKLSGMLEGFIWSPKSGEANDRIDDWAFEEGPHSDFGGPNSGSTACVAVIRGKKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEAEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQIVTAEPDITSVELCDDDEFLVIACDGIWDCMSSQQLVDFIHHQLETENKLSAVCEKVFDRCLAPTAGGEGCDNMTMILIQFKKPSSPDASVANQPQSSAQSSAQSSAQPQSSEADRSSEKRESK 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00069 371 Gene3D - 1 329 IPR036457 -
Cca11g00069 371 MobiDBLite consensus disorder prediction 333 360 - -
Cca11g00069 371 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Cca11g00069 371 ProSiteProfiles PPM-type phosphatase domain profile. 23 328 IPR001932 -
Cca11g00069 371 MobiDBLite consensus disorder prediction 332 371 - -
Cca11g00069 371 Pfam Protein phosphatase 2C 155 313 IPR001932 -
Cca11g00069 371 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Cca11g00069 371 SMART PP2C_4 13 326 IPR001932 -
Cca11g00069 371 CDD PP2Cc 23 328 IPR001932 -
Cca11g00069 371 SUPERFAMILY PP2C-like 3 330 IPR036457 -
Cca11g00069 371 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Cca11g00069 371 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00069 Cca-Chr11 772868 780959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00069 1 332 PP2C-type Phosphatase Gene Family AT2G25070 75.676 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00069 K17499 - gmx:100776787 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00069 11 772868 780959 Cca11g00069 11 772868 780959 ECH