Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00068 ATGATAATCAAGGTGAAAGAGTCGACGATGGTGAGGCCGGCGGAGGAGGTGGCGCGGCGGGTGGTGTGGAACTCGAACGTGGACCTGGTGGTGCCGAATTTCCACACGCCGAGCGTGTACTTCTACAGGGCGAACGGCGCCACCAACTTTTTCGACTGCAAGGTTTTGAAGGAGGCGCTGAGCAAGGTTCTGGTGGCGTTCTACCCAATGGCGGGGCGGCTCCGGCGAGACGAAGACGGGCGCGTGGAGATCGACTGCGACGGCCAAGGGGTGCTCTTGGTGGAGGCCGACACCGGCGCCGTCATCGACGATTTCGGCGACTTCGCCCCCACGCTTGAGCTCCGTCAGCTTATCCCCGCCGTGGATTACTCGCAAGGGATCGAAAGCTATCCCCTCTTGGTCTTACAGGTAACACATTTCAAATGTGGAGGGGTGTCACTGGGAGTTGGCATGCAACATCACGTAGCAGACGGAGCCTCTGGTCTTCACTTCATCAACACATGGTCTGACGTGGCCCGTGGCTTGGACGTGTCCATTCCACCCTTCATTGACCGAACAATACTTCGTGCACGTGATCCACCTCGACCCGTTTTTGACCACATTGAATACAAGCCCCCACCAGCCATGAAGACTCCACAACCCACAAAACCAGGTTCGGATAGTGCAGCAGTTTCTATCTTCAAACTCACACGTGACCAGCTCAACAAACTCAAAGCCAAGTCCAGAGAAGACGGCAACACAGTCAGCTACAGCTCCTATGAGATGCTGGCGGGACACGTGTGGAGAAGCGTGTGCAGGGCAAGAGCACTCCCTGATGATCAAGAAACCAAGTTGTACATTGCAACTGATGGAAGGTCAAGGTTGCAACCTCCACCCCCATCAGGGTACTTCGGCAATGTGATATTCACAACCACGCCTATTGCTGTGGCTGGTGATCTCATGTCAAAGCCAACATGGTATGCTGCAAGCAGAATCCACAATGCATTGGTGAGAATGGACAATGAGTATTTGAGATCAGCCCTTGATTACCTAGAGCTGCAGCCTGATCTGAAGGCTCTGGTTCGTGGGGCCCACACTTTCAAGTGTCCAAACCTTGGCATCACTAGCTGGACCAGGCTTCCGATCCATGATGCTGATTTTGGTTGGGGGAGGCCCATTTTCATGGGACCAGGTGGAATTGCATACGAGGGGCTATCTTTCATTATTCCAAGCTCAGCCAATGATGGAAGCTTGTCTGTGGCAATTGCTCTTCAGCCAGACCATATGAAGGTGTTTGAGGATTTCTTGTATGACATTTGA 1299 0.535 MIIKVKESTMVRPAEEVARRVVWNSNVDLVVPNFHTPSVYFYRANGATNFFDCKVLKEALSKVLVAFYPMAGRLRRDEDGRVEIDCDGQGVLLVEADTGAVIDDFGDFAPTLELRQLIPAVDYSQGIESYPLLVLQVTHFKCGGVSLGVGMQHHVADGASGLHFINTWSDVARGLDVSIPPFIDRTILRARDPPRPVFDHIEYKPPPAMKTPQPTKPGSDSAAVSIFKLTRDQLNKLKAKSREDGNTVSYSSYEMLAGHVWRSVCRARALPDDQETKLYIATDGRSRLQPPPPSGYFGNVIFTTTPIAVAGDLMSKPTWYAASRIHNALVRMDNEYLRSALDYLELQPDLKALVRGAHTFKCPNLGITSWTRLPIHDADFGWGRPIFMGPGGIAYEGLSFIIPSSANDGSLSVAIALQPDHMKVFEDFLYDI 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00068 432 MobiDBLite consensus disorder prediction 198 221 - -
Cca11g00068 432 Gene3D - 1 205 IPR023213 -
Cca11g00068 432 Gene3D - 213 432 IPR023213 -
Cca11g00068 432 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 4 431 - -
Cca11g00068 432 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 4 431 - -
Cca11g00068 432 Pfam Transferase family 3 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00068 Cca-Chr11 746835 751221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00068 1 432 Monolignol Biosynthesis Gene Families AT5G48930 77.367 0.0 707
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00068 K13065 - gmx:100820075 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00068 11 746835 751221 Cca11g00068 11 746835 751221 ECH
Cca10g00036 10 392288 396398 Cca11g00068 11 746835 751221 PCT