Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00052 ATGATAAAAGCTTCTCTCTACTGTCCCTCCGATTCCGCATTTCTCTGCTCCGACTGCGACGCCGCCGTGCACGCCGCCAACTTCCTCGTAGCTCGCCACCTCCGCCGTCTCCTGTGCTGCAAATGCGACCGCTTCGCCGGAATTCACATCTCCGGCGCCTCCTCCCGGCGGCTCCCCTCCACCTGCGGCTGGTGCTCGGCGGAGAATCCTTCGTGTTCGTCGACGCGCGTGTCCAGCTCGGAGAAGAAAACGAGGCCGGCGGAGAAGAGGAAGAGCTGCGGGAGGTCGGAGGCGGCGGAGAAGCGGCGGAGGAATGTGGGATGGGAAGCGGCGGAGGAGGTGTTGGAGAAATGGAGCAGAGAGTTAGGGTTAGGGTTAGGGGAAAACGGGAATCGCGTGGCGTCGCACGCTCTGAATGTGTGCCTGGAAAAGTGGAGGTGTCTCCCGTTGAGAGTGGCCGCGGCGACGTCGTTTTGGTTGGGCATGAGATTTTGTGGGGACGGGGGCCTGGCCACGTGTCAGAATCTGGCGAGGTTGGAGGCAAAATCGGGGGTGCCAGCTAAGCTCATTGTGGCCGCACATGCCAACCTCTCACGTGTCTTGGCGCAACGCCGCGCCTTGCAAGAAGGATGGGGCGAGTCCTAG 645 0.6217 MIKASLYCPSDSAFLCSDCDAAVHAANFLVARHLRRLLCCKCDRFAGIHISGASSRRLPSTCGWCSAENPSCSSTRVSSSEKKTRPAEKRKSCGRSEAAEKRRRNVGWEAAEEVLEKWSRELGLGLGENGNRVASHALNVCLEKWRCLPLRVAAATSFWLGMRFCGDGGLATCQNLARLEAKSGVPAKLIVAAHANLSRVLAQRRALQEGWGES 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00052 214 PANTHER B-BOX ZINC FINGER PROTEIN 32-LIKE 3 200 - -
Cca11g00052 214 MobiDBLite consensus disorder prediction 81 96 - -
Cca11g00052 214 CDD Bbox1_BBX-like 4 38 - -
Cca11g00052 214 MobiDBLite consensus disorder prediction 68 96 - -
Cca11g00052 214 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00052 Cca-Chr11 577096 579287 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00052 3 214 C2C2-CO-like Transcription Factor Family AT3G21150 30.415 4.99e-22 88.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00052 - - ccaj:109816998 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00052 11 577096 579287 Cca11g00052 11 577096 579287 ECH