Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00045 ATGAACGGCCACCTCACCGTAAACATCGCTGACAGGAGCCCTGACGACGATGACACCGTCCCTCCCTCCGACAACCACCACGATGACGACGAAGAACTCATCGATCCCGACGATCCTTTCGACATTACGCAGACTAAGAACGCCTCACACGACACGCTTCGCCGTTGGAGACAAGCAGCACTCGTGCTCAATGCGTCCAGGCGTTTTAGATACACTTTGGACTTGAAAAAAGAAGAAGAGAAAGAGCAAAAGAAACACTTGATTAGAGCCCATGCACAAGTCATAAGAGCGGCACTGCTTTTCAGATTAGCTGGTGAACGTGAACTAGTGATAAGTACAGCAGTGACACCCCCAACACCAGTTGGTGACTATGCTATTGGTCTCGAACAACTTGTTTCAATGTCTAAGGACCAGAATGTTTCTGCTCTACAACAATATGGAGGGGCAATGATATCTTTTCAGATTAGTGGCTTATCAAATTTAATAAAATCTAATCCGGATAAAGGTATCGGTGGAGATGATGCTGATCTGTTAAAAAGAAAAAATGCATTTGGAACTAATACATATCCTCGGAAAAAAGGGAGAAGTTTTTGGAGGTTTTTATGGGAAGCTTGGCAAGATCTGACTCTCATAATATTGATAATTGCTGCTGCGGTGTCATTGGCACTAGGAATAAAAACAGAGGGTTTGGAGGAAGGATGGTATGATGGGGGAAGCATTGCTTTTGCAGTTTTTCTTGTCATTGTAGTTACGGCTGTCAGTGATTATCGGCAATCTCTTCAGTTTCAGAATTTGAATGCTGAAAAACAAAATATACAATTGGAGGTTATTAGAGGTGGGAGAACAATTAAAATGTCAATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGACCAGGTTCCAGCTGATGGAGTCTTAATCACAGGCCATTCACTTGCAATTGATGAATCCAGTATGACTGGTGAAAGCAAGATCGTTCATAAGGATCACAAAGCACCTTTTTTGATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGTGTTATGCTGGTAACTGGTGTTGGTATAAATACTGAATGGGGATTGTTGATGGCAAGTATCTCAGAGGACACCGGAGAAGAGACTCCGTTACAGGTGCGTTTGAATGGAGTAGCAACGTTTATTGGTGTAGTTGGGCTTACCGTAGCCGTTTTAGTGCTTGCTGTCCTCTTGGGCAGATACTTTTCTGGCCGTACCAAAGATTTAGAAGGAAACGTCCAATTTGTTGCCGGAAAGACTAGTGTTAGCAATGTAGTAGACGGGGTCATCAAAATTTTTACCATTGCAGTCACAATTGTGGTCGTTGCAGTGCCTGAAGGTCTACCTTTGGCTGTTACCTTAACCTTGGCATACTCAATGCGGAAAATGATGGCAGACAAGGCTTTGGTACGACGGCTATCAGCCTGTGAAACTATGGGCTCTGCCACAACAATTTGCAGTGATAAGACAGGAACATTGACCTTAAATCAGATGACTGTTGTTGAGGCGTATGTTGGGAGGGCAAAACTAAATCCACCAGATGACTCATCAAAGTTGCATCCAAAATCATTGTCTCTGATAAATGAGGGCATTGCACAGAATACAACTGGAAATGTTTTTGTACCAAAGGATGGCGGAGAGACAGAGGTTTCAGGATCACCTACAGAGAAGGCAATTCTTTCATGGGCAGTCAAGTTGGGTATGAATTTTGATGTTATAAGATCAAATTCGAAAGTTCTCCATGTCTTCCCCTTCAATTCTGAGAAAAAGCGAGGGGGTGTTGCTTTGAAGCTGGAGGATTCTGAAATACATATACATTGGAAGGGAGCTGCAGAGATAGTTTTAGGAGCATGTACTCAATATCTTGATTCAAATGGTCAATTGCAAACCGTCGAAGAAGAGAAGGTGTTTTTCAAGGAAGCTATTGATGACATGGCTGCTCGCAGCTTGCGTTGTGTTGCCATTGCATACAGATCATACGAATTAGACAAAGTTCCATCCAATGAGCAGGATTTAGACCAGTGGTCCTTACCAGAACACGAGCTTGTATTGCTTGCTATTGTTGGAATAAAGGATCCTTGTCGCTCTGGTGTCAAAGATGCTGTAAAAATATGCAGTGATGCTGGTGTTAAGGTACGCATGGTAACTGGAGACAACCTTCAAACAGCAAAGGCAATAGCTTTGGAATGTGGTATACTGGCTTCAACTGAAGATGCTGTCGAGCCAAACATAATTGAAGGAAAGAAATTCCGTGAACTATCTGAAAAGGAAAGAGAAGATATTGCCAAGAAGATAACTGTGATGGGGAGGTCTTCTCCAAATGACAAGCTTTTGCTTGTGCAAGCACTACGTAAAGGTGGGGAAGTTGTTGCTGTCACAGGAGATGGCACCAATGATGCTCCTGCACTTCATGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCCTAGATGATAACTTTGCCTCAGTCGTAAAGGCAAGtattctattctatttaGTTGTTCGCTGGGGCCGCTCTGTTTATGCAAATATTCAGAAATTTATCCAGTTCCAGCTTACAGTTAATGTTGCTGCTCTAGTAATAAATGTTGTGGCAGCAATAACTTCTGGTGATGTCCCTCTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGATACACTAGGGGCGCTTGCACTGGCTACTGAACCGCCAACAGACCGCCTAATGCACAGATCACCAGTTGGCCGAAGGGAACCTCTTATAACAAATATAATGTGGAGAAACTTGATCGTACAGGCTGTCTATCAAATCACAGTTCTTCTCGTTCTTAATTTCTGTGGTGAAAGAATTCTGCCCAAGCAAAGTACTAGAGCCGAAGCCTTTCAAGTGAAGAATACTTTAATATTCAATGCGTTCGTCCTGTGCCAAATATTCAATGAATTCAATGCTCGGAAACCCGATGAAATGAATGTTTTCCGTGGAGTGACGAAGAACCGTCTTTTCATGGGCATTGTTGGAGTTACCTTTATACTTCAGATAATAATAATCGAGTTCCTTGGAAAGTTCACCTCAACAGTGAAGCTTGATTGGAAGTTATGGCTTACTTCTCTTGTTATTGGCCTTGTCAGCTGGCCCCTTGCTATAGCCGGAAAATTCATTCCAGTTCCCAAAACACCATTGTCTCGTTACTTCTTGAAGCCACTCAGGCGATTAAGGAGGTCTCGTGGTGCTACACAACAATAG 3294 0.4256 MNGHLTVNIADRSPDDDDTVPPSDNHHDDDEELIDPDDPFDITQTKNASHDTLRRWRQAALVLNASRRFRYTLDLKKEEEKEQKKHLIRAHAQVIRAALLFRLAGERELVISTAVTPPTPVGDYAIGLEQLVSMSKDQNVSALQQYGGAMISFQISGLSNLIKSNPDKGIGGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLALGIKTEGLEEGWYDGGSIAFAVFLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRTIKMSIFDIVVGDVIPLKIGDQVPADGVLITGHSLAIDESSMTGESKIVHKDHKAPFLMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGVVGLTVAVLVLAVLLGRYFSGRTKDLEGNVQFVAGKTSVSNVVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYVGRAKLNPPDDSSKLHPKSLSLINEGIAQNTTGNVFVPKDGGETEVSGSPTEKAILSWAVKLGMNFDVIRSNSKVLHVFPFNSEKKRGGVALKLEDSEIHIHWKGAAEIVLGACTQYLDSNGQLQTVEEEKVFFKEAIDDMAARSLRCVAIAYRSYELDKVPSNEQDLDQWSLPEHELVLLAIVGIKDPCRSGVKDAVKICSDAGVKVRMVTGDNLQTAKAIALECGILASTEDAVEPNIIEGKKFRELSEKEREDIAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKASILFYLVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAITSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDRLMHRSPVGRREPLITNIMWRNLIVQAVYQITVLLVLNFCGERILPKQSTRAEAFQVKNTLIFNAFVLCQIFNEFNARKPDEMNVFRGVTKNRLFMGIVGVTFILQIIIIEFLGKFTSTVKLDWKLWLTSLVIGLVSWPLAIAGKFIPVPKTPLSRYFLKPLRRLRRSRGATQQ 1097
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00045 1097 SMART Cation_ATPase_N_a_2 154 225 IPR004014 -
Cca11g00045 1097 Gene3D - 203 1060 - -
Cca11g00045 1097 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 502 699 IPR023299 GO:0000166
Cca11g00045 1097 PRINTS P-type cation-transporting ATPase superfamily signature 717 727 - -
Cca11g00045 1097 PRINTS P-type cation-transporting ATPase superfamily signature 695 706 - -
Cca11g00045 1097 PRINTS P-type cation-transporting ATPase superfamily signature 319 333 - -
Cca11g00045 1097 PRINTS P-type cation-transporting ATPase superfamily signature 495 509 - -
Cca11g00045 1097 PRINTS P-type cation-transporting ATPase superfamily signature 802 821 - -
Cca11g00045 1097 PRINTS P-type cation-transporting ATPase superfamily signature 826 838 - -
Cca11g00045 1097 ProSitePatterns E1-E2 ATPases phosphorylation site. 497 503 IPR018303 -
Cca11g00045 1097 Pfam Cation transporting ATPase, C-terminus 894 1069 IPR006068 -
Cca11g00045 1097 Pfam Ca2+-ATPase N terminal autoinhibitory domain 37 80 IPR024750 GO:0005516
Cca11g00045 1097 CDD P-type_ATPase_Ca_PMCA-like 177 942 - -
Cca11g00045 1097 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 152 1072 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Cca11g00045 1097 MobiDBLite consensus disorder prediction 10 29 - -
Cca11g00045 1097 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 769 890 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca11g00045 1097 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 431 523 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cca11g00045 1097 Gene3D - 175 371 - -
Cca11g00045 1097 PANTHER CATION TRANSPORTING ATPASE 37 1087 - -
Cca11g00045 1097 MobiDBLite consensus disorder prediction 1 40 - -
Cca11g00045 1097 SUPERFAMILY Calcium ATPase, transduction domain A 273 368 IPR008250 -
Cca11g00045 1097 Pfam E1-E2 ATPase 272 473 - -
Cca11g00045 1097 SFLD C1.7: P-type atpase like 477 848 - -
Cca11g00045 1097 PANTHER CALCIUM-TRANSPORTING ATPASE 37 1087 - -
Cca11g00045 1097 SUPERFAMILY Calcium ATPase, transmembrane domain M 155 1072 IPR023298 -
Cca11g00045 1097 Pfam haloacid dehalogenase-like hydrolase 492 816 - -
Cca11g00045 1097 Pfam Cation transporter/ATPase, N-terminus 156 220 IPR004014 -
Cca11g00045 1097 Gene3D - 492 847 IPR023214 -
Cca11g00045 1097 PRINTS Sodium/potassium-transporting ATPase signature 488 509 - -
Cca11g00045 1097 PRINTS Sodium/potassium-transporting ATPase signature 238 258 - -
Cca11g00045 1097 PRINTS Sodium/potassium-transporting ATPase signature 614 632 - -
Cca11g00045 1097 SUPERFAMILY HAD-like 493 914 IPR036412 -
Cca11g00045 1097 Gene3D - 505 702 IPR023299 GO:0000166
Cca11g00045 1097 Gene3D - 48 102 - -
Cca11g00045 1097 SFLD p-type atpase 477 848 IPR044492 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00045 Cca-Chr11 481257 496420 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00045 2 1094 Primary Pumps ATPases AT3G21180 75.320 0.0 1662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00045 K01537 - gmx:100777845 1892.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00045 11 481257 496420 Cca11g00045 11 481257 496420 ECH