Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00042 ATGGAAATCAAAGGGGATCTTGAAGCAGCCAGAAATAGCTTGACAACTAGTTTGGAAACATCAAGCGCTATTGCCTCTGCATTAGATGAGTCTGGATCAAGATTGGAGCTACTTAACCAGAAATATCTGTCCTTGCAAGCTTCCCTTAGACCCATCTCAATGCAAAGGTGCACATTAGTTAACATTGACCATGGTATAGACAGTGTTCTATGTTCTGCTGCTGCCGTCCTCAAGGTTTTTGACTCTGTTAATCAGTTGGAGCATTCTCTCTTGAAAGACCCTTGTTCTGATCTACACACCTATGTCTCAGACACAAAGAAGCTTGAGGAGGCACTGAAGCTCCTCACTGATAATTGCAGGTTAGCAGTTGGCTGGTTGAAGGGCGTTTTTGAGTTCTTACAAGACAAAGCAATTACCAATGAGCTTTACCTGTTGAATATGAAGAAATCTTTGAGAATATTGCAACAATTGCAGGCCAAGGAGGAAGGTGCTCGCCTTGATGGAGGACTTCTTAGTACTGCTTTTGACAAACTAGAGCTTGAGTTCCACAGGCTTCTGATAGCAAACTCGATGCCTCTTCCTTTGGTTTCGTTGACATCACACATTGGCCAACAATTTTTGCCATTGACAGGTTCTTTGGCAGGGAAGTTGCATGCCATCATTGAGAGATTACATGCTACTGGCAGGCTAGACAAGTGTCAATCTATATACGTTGAAGTTCGAGTTACGAATGCTCGTCGAAGCTTGAAGACTTTAGATTTGAGTTACTTCGAGACTACAACAGCTGAATTTGAGGCTGGGCAGTGTATAGAGAGTTACATAGACCAATGGGGCAGCCATTTGGAGTTGGTTGTGAAGCGATTGCTTGAGATTGAGTGCAGGCTCTCTACTATTGTCTTTGAGAAAATTGGGCCAGAAGCATGGATGGGGTGTTTTGCAAAGATTGCCACTGAATCAGGGATTCTTTCTTTTATTCAATTTGGAAGGATAGTTACTGAGAGGAAAAATGATCCCTTCAAGTTGCTGAACCTGCTGTCCATATTCAGGGTCTTAAATGGCCTAAGACTAGAATTCAACCAGCTTTTCAGCTGGAAAGCTTGTAAAGAAATTAGAACTGTGACAGAGGATCTTATCAAAAAAGTAGTCAATGGTGCCAGTGAGATATTCTGGCAACTTCCAGCACAAGTTAAGTTGCAAAGGCCAACTTCTCCTCCCCCAGATGGCAGTGTTCCCAGGCTTGTAAGCTTTGTGACAGATTACTGCAATCAGTTGCTTGGTGATGCCTTTAGGCCACATTTGACACAGGTTTTGAGAATACATCTTAGCTGGAGAAAGGAATCATATGAAGAGGGTATTGTTTTAAGCCAAATATATAACACAATCAAGGAGGTTGCGGTTAATTTGGATGCTTGGTCCAAGGTCTATGAAGATATCACTTTGTCCTACCTTTTTATGATGAATAACCACTGTCATTTCAGCAATTTGAGGGGTACTGTGCTTGGAAATATGATGGGAGATTCTTGGTTAAGAGCACACGAACAATATAAGGACTATTATGCAGCACTTTATTTGAGGAATAGCTGGGGAAAGGTTCTACCTATTCTTGTAGTTCAAAAGGACATACTTTCATCCTCTGGTGCAAGTGTGACAAGCCAAGATTTGGCAAAGAAGCTAAATGCTTTCAATTTAGCTTTTGATGAAAGGTACAAGAAACAATCTAATTGGGTAATATCAGATGAGATCTTGAGGGAAAATATATGCAAGCATTTGGCGGAAGGTATTGTGCCAATCTACAAAGCCTATGTCAAGAATTATTGTTTGTTAATTGAAAGTGATGCTAAGGTTGACAAGAATATGAAATATACTGCGCAGAGTTTGGAGAACAAGATTTGGTCTCTGTTTCAGCCAAAGCAGAGGAAGGGTAGTAGCATTAAACAGACAGACTTGATTACTAAAATAAAAGAAGTCAGTCATCAATTCCGTTTGACTCTAGCTGCTCTATGA 2004 0.4097 MEIKGDLEAARNSLTTSLETSSAIASALDESGSRLELLNQKYLSLQASLRPISMQRCTLVNIDHGIDSVLCSAAAVLKVFDSVNQLEHSLLKDPCSDLHTYVSDTKKLEEALKLLTDNCRLAVGWLKGVFEFLQDKAITNELYLLNMKKSLRILQQLQAKEEGARLDGGLLSTAFDKLELEFHRLLIANSMPLPLVSLTSHIGQQFLPLTGSLAGKLHAIIERLHATGRLDKCQSIYVEVRVTNARRSLKTLDLSYFETTTAEFEAGQCIESYIDQWGSHLELVVKRLLEIECRLSTIVFEKIGPEAWMGCFAKIATESGILSFIQFGRIVTERKNDPFKLLNLLSIFRVLNGLRLEFNQLFSWKACKEIRTVTEDLIKKVVNGASEIFWQLPAQVKLQRPTSPPPDGSVPRLVSFVTDYCNQLLGDAFRPHLTQVLRIHLSWRKESYEEGIVLSQIYNTIKEVAVNLDAWSKVYEDITLSYLFMMNNHCHFSNLRGTVLGNMMGDSWLRAHEQYKDYYAALYLRNSWGKVLPILVVQKDILSSSGASVTSQDLAKKLNAFNLAFDERYKKQSNWVISDEILRENICKHLAEGIVPIYKAYVKNYCLLIESDAKVDKNMKYTAQSLENKIWSLFQPKQRKGSSIKQTDLITKIKEVSHQFRLTLAAL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00042 667 Gene3D Exocyst complex component Exo70 132 642 - -
Cca11g00042 667 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 4 659 - -
Cca11g00042 667 Pfam Exo70 exocyst complex subunit 276 630 IPR046364 GO:0000145|GO:0005546|GO:0006887
Cca11g00042 667 SUPERFAMILY Cullin repeat-like 76 634 IPR016159 -
Cca11g00042 667 PANTHER EXOCYST COMPLEX PROTEIN EXO70 4 659 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00042 Cca-Chr11 437794 439797 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00042 7 654 EXO70 exocyst subunit family AT4G31540 49.096 0.0 635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00042 11 437794 439797 Cca11g00042 11 437794 439797 ECH