Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00018 ATGAGGGACAAGGACAAAGAAAAAGAGACAGAGAAGAAGAAGTACCCTATCGGCGCCGAGCATTACCTTCTCTACGAGGAGATTGGCCAAGGCGTAAGCGCTTCCGTGCACCGGGCGCTATGCGTTCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAATCGCGATCTCAACAACGTTTCTCGTGAGGCCCAGACCATGATCCTCGTCGATCACCCTAACGTCCTCAAATCGCACTGCTCCTTCGTCGCCGAGCACAATCTTTGGGTGGTTATGCCGTTCATGGCCGGCGGTTCATGCCTCCACATATTGAAAGCCGCGCATCCCGATGGTTTTGAAGAGGTTGTCATTGCAACCATTCTCAAAGAGGTATTGAAGGGTTTGGAGTATCTTCACCATCACGGACACATCCACCGTGACGTCAAAGCCGGTAACATTCTCATTGATTCGCGCGGCACCGTTAAACTCGGCGATTTCGGTGTTTCTGGCTGCCTATTAGATTCCGGCGACCTTGGTGCGAAAAGCACTTTAAGGTCGGCACGAACCTTGGTGCGAAGAGCACTTTAA 582 0.5206 MRDKDKEKETEKKKYPIGAEHYLLYEEIGQGVSASVHRALCVPFNEVVAIKILDFERDNRDLNNVSREAQTMILVDHPNVLKSHCSFVAEHNLWVVMPFMAGGSCLHILKAAHPDGFEEVVIATILKEVLKGLEYLHHHGHIHRDVKAGNILIDSRGTVKLGDFGVSGCLLDSGDLGAKSTLRSARTLVRRAL 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00018 193 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 179 - -
Cca11g00018 193 Gene3D Phosphorylase Kinase; domain 1 10 99 - -
Cca11g00018 193 SMART serkin_6 22 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00018 193 Pfam Protein kinase domain 25 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00018 193 SUPERFAMILY Protein kinase-like (PK-like) 20 174 IPR011009 -
Cca11g00018 193 ProSiteProfiles Protein kinase domain profile. 22 193 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca11g00018 193 Gene3D Transferase(Phosphotransferase) domain 1 103 190 - -
Cca11g00018 193 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Cca11g00018 193 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 11 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00018 Cca-Chr11 242721 243302 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00018 11 175 MAP Kinase Kinase Kinase Kinase AT1G79640 83.636 2.78e-102 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Cca11g00018 Pkinase 8.3e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00018 K08835 - ccaj:109808241 381.719