Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca11g00017 | ATGAGGGACAAGGACAAAGAAAAAGAGACAGAGAAGAAGAAGTACCCTATCGGCGCCGAGCATTACCTTCTCTACGAGGAGATTGGCCAAGGCGTAAGCGCTTCCGTGCACCGGGCGCTATGCGTTCCCTTCAACGAGGTCGTCGCCATCAAAATCCTCGACTTCGAACGTGACAATCGCGATCTCAACAACGTTTCTCGTGAGGCCCAGACCATGATCCTCGTCGATCACCCTAACGTCCTCAAATCGCACTGCTCCTTCGTCGCCGAGCACAATCTTTGGGTGGTTATGCCGTTCATGGCCGGCGGTTCATGCCTCCACATATTGAAAGCCGCGCATCCCGATGGTTTTGAAGAGGTTGTCATTGCAACCATTCTCAAAGAGGTATTGAAGGGTTTGGAGTATCTTCACCATCACGGACACATCCACCGTGACATCAAAGCCGGTAACATTCTCATTGATTCGCGCGGCACCGTTAAACTCGGCGATTTCGGTGTTTCTGCCTGCCTATTAGATTCCGGCGACCTTGGTGCGAAAAGCACTTTAAGGTCGGCACGAACCTTGGTGCGAAGAGCACTTTAA | 582 | 0.5189 | MRDKDKEKETEKKKYPIGAEHYLLYEEIGQGVSASVHRALCVPFNEVVAIKILDFERDNRDLNNVSREAQTMILVDHPNVLKSHCSFVAEHNLWVVMPFMAGGSCLHILKAAHPDGFEEVVIATILKEVLKGLEYLHHHGHIHRDIKAGNILIDSRGTVKLGDFGVSACLLDSGDLGAKSTLRSARTLVRRAL | 193 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca11g00017 | 193 | ProSiteProfiles | Protein kinase domain profile. | 22 | 193 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca11g00017 | 193 | SUPERFAMILY | Protein kinase-like (PK-like) | 20 | 174 | IPR011009 | - | |
Cca11g00017 | 193 | Gene3D | Phosphorylase Kinase; domain 1 | 10 | 99 | - | - | |
Cca11g00017 | 193 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 11 | 179 | - | - | |
Cca11g00017 | 193 | SMART | serkin_6 | 22 | 193 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca11g00017 | 193 | Pfam | Protein kinase domain | 25 | 170 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca11g00017 | 193 | Gene3D | Transferase(Phosphotransferase) domain 1 | 103 | 190 | - | - | |
Cca11g00017 | 193 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 11 | 179 | - | - | |
Cca11g00017 | 193 | ProSitePatterns | Protein kinases ATP-binding region signature. | 28 | 51 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca11g00017 | Cca-Chr11 | 240437 | 241018 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca11g00017 | 11 | 175 | MAP Kinase Kinase Kinase Kinase | AT1G79640 | 83.636 | 8.82e-103 | 308 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE20-Fray | Cca11g00017 | Pkinase | 2.8e-34 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca11g00017 | K08835 | - | ccaj:109808241 | 379.022 |