Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00016 ATGAAACAACTTCCAAGAATCATAAAAAAGATTCCAAGCCCTCTGAAGTTGGTATCGAGAAAGTCATCATCAAGGTCAAGCGCAAAGAAGCCATTGTTGGAGGCAGGAGAATCTTCCGACGGCACACGGATCAAGGTTCCCAAAGGATTCCTCGCCGTTTATGTGGGCCCCCACCTTCGGAGGTTCGTGATTCCAATAAGCTTCTTGGCCATGCCTGACTTCAGGGTTTTGATGGAAACGGTGACTGATGAATATGGTTGCGATCACAACGGTGCCATTCAAATCCCATGCGATGAACATTATTTTCAGCAAATTTTGACATCCTGTTCTCAAACAAAAAAACAACGGATCATTTTCCCTAATAACATCCCATTCACATGTACATATTAA 390 0.4333 MKQLPRIIKKIPSPLKLVSRKSSSRSSAKKPLLEAGESSDGTRIKVPKGFLAVYVGPHLRRFVIPISFLAMPDFRVLMETVTDEYGCDHNGAIQIPCDEHYFQQILTSCSQTKKQRIIFPNNIPFTCTY 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00016 129 PANTHER OS02G0143300 PROTEIN 16 115 - -
Cca11g00016 129 MobiDBLite consensus disorder prediction 18 42 - -
Cca11g00016 129 Pfam Auxin responsive protein 22 107 IPR003676 GO:0009733
Cca11g00016 129 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 16 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00016 Cca-Chr11 239433 240186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00016 46 106 Calmodulin-binding Proteins AT3G43120 57.377 1.87e-21 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00016 K14488 - gmx:102663803 148.288