Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00015 ATGGATTCAAAGAAATGTAACAAGATAAGAGAGGTGGTTAGGCTTCAACAAATCCTTAACAAGTGGAAGAAAGTGGCAGCTGCTTCTGCTTCCAACAACACTAAAGGCATCAAGTTTTTAAAACGAACCCTCTCATTCACCGACTCCAACGATGTTGTTCCAAAAGGCTTCCTAGCTGTTTGCGTAGGGAAGGAGCTCAAGAGATTCACTATTCCCACCCATTACTTGAAACACAAAGCGTTTCAGATGTTGCTTCGACAAGCCGAAGAGGAGTTTGGTTTCCAGCAAGAGGGTGTCCTCAAATTCCCATGCCAAGTCTCAGTGTTCGAGAAAATATTGAAGGCCGTCCAAGATAACAATGGAGACAAAGATAATATTAGTTATTCTGAACTTCATCATGCTCAAACGTGTACATAG 417 0.4197 MDSKKCNKIREVVRLQQILNKWKKVAAASASNNTKGIKFLKRTLSFTDSNDVVPKGFLAVCVGKELKRFTIPTHYLKHKAFQMLLRQAEEEFGFQQEGVLKFPCQVSVFEKILKAVQDNNGDKDNISYSELHHAQTCT 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00015 138 Pfam Auxin responsive protein 21 115 IPR003676 GO:0009733
Cca11g00015 138 PANTHER OSJNBA0060N03.10 PROTEIN 5 124 - -
Cca11g00015 138 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 124 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00015 Cca-Chr11 238313 238729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00015 1 120 Calmodulin-binding Proteins AT2G24400 59.848 1.37e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00015 K14488 - gmx:100818996 204.912