Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01982 ATGGCAGCCTCAGCCTCAGCCTCATCCATGATATCCCTGTCTCCCACCCTCCACAACCACCAAAGCCACAACCTTGTGAAGCCCTCCAACGTGTCCTTTCAGGGCCTAAGACCCCTCACAAGGTCCAATATTGCCACCAAAGTAAGCAGCAAGAAAAGGGTCCCTCGTGGTGGTGGTGTTGTGAGAGCTGAGTTGAACTCTGCCCTTGTGATAAGCCTCAGCACTGGCCTCTCCCTTTTCCTTGGGAGGTTTGTGTTCTTCAACTTCCAAAGGGAGAATGTGGCAAAACAAGTGCCTGAGCAGAATGGTCTCACACACTTTGAGGCTGGTGACACACGTGCCAAGGAGTATGTCAGCCTCCTCAAGTCCAATGACCCTGTTGGCTTCAACATAGTTGATGTCTTGGCTTGGGGCTCCATTGGCCATGTTGTTGCTTACTACATCTTGGCCACCACTAGCAATGGCTATGACCCCAAATTCTTTGGTTGA 489 0.5133 MAASASASSMISLSPTLHNHQSHNLVKPSNVSFQGLRPLTRSNIATKVSSKKRVPRGGGVVRAELNSALVISLSTGLSLFLGRFVFFNFQRENVAKQVPEQNGLTHFEAGDTRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHVVAYYILATTSNGYDPKFFG 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01982 162 PIRSF PsaK 1 162 IPR016370 -
Cca10g01982 162 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 3 162 IPR016370 -
Cca10g01982 162 ProSitePatterns Photosystem I psaG and psaK proteins signature. 128 145 IPR000549 GO:0009522|GO:0015979|GO:0016020
Cca10g01982 162 PANTHER BNAC03G70700D PROTEIN 3 162 - -
Cca10g01982 162 TIGRFAM PS_I_psaG_plant: photosystem I reaction center subunit V 70 157 IPR017494 GO:0009522|GO:0009535|GO:0015979
Cca10g01982 162 Pfam Photosystem I psaG / psaK 66 156 IPR000549 GO:0009522|GO:0015979|GO:0016020
Cca10g01982 162 Gene3D - 67 161 IPR023618 GO:0009522|GO:0015979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01982 K08905 - gmx:100499718 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01982 10 37791672 37792646 Cca10g01982 10 37791672 37792646 ECH