Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01976 ATGGATTTGGGAAACGAATACGTGGAAGAGAACGAAGTGAATCATGATGAAAATGGAAACGGTGGTTCTTACGGTAACGATAAATTTGACTTGGGTTTCGAGGGAAATTCGGATGTCAACGGATTGGATCGAAAGGGAACGGGTGTTGAAGTTGAAGTAGGTAGTGGGGAAGGCGAGAATTCCAAAGGGACACCGACAAAGGGGTTTGGGTTGAGGAAATGGAAGAGAATTAGGAGGAATGTTGTTAAGGATCCGAATTCAAGTGTTGATTCAGGTAAAGCGTTGAAGAGGGGTTTGTCTGGTAATGCCAATTTGAGTGAAAATCAGCCTTTTCTGCGTGATGTTAAGGAGAGAAGTGACGGATCTTCGAATATGTTTGGGAATGTAGTGTTTTCTGATGGCAATGTGATCCATGGTTCGAGTTCGGATTCTAGATATGCACATGGATCTGGTTTTGTTGTTGGGACTGATTCTGAGAATAGTGAGGATCGAAGTAGCAAGTCTTCTACGGCGGCAAGTGAGCCCAATTTAAGTCTCGAGAAAAGCCGTAGCAGGAACGTTAATTCAAAGCATTTAGCAAACTCGGCTCAACGAGTTCAACAGGGAAAGGGACGGACTGAAAGCAGTAAGAAGCCGGGAGAAGGTGGAAGAGTCAAAATTGAGAAGGAAAATTCTTTTTCTAGTTTGGAATCTGATTCAAGAAGCTCCAACTTCAGGCAAGGTGTTTTTACTGTTACTAGTAATGGGAAACACAGTGGCAGGCCAAATGTTTATGATGGAATTAATAGTGGTGAAGCACACACTAATGAACATTTCACTGAGGGAGTTGAAGCTAGTTATGGAAATGAAAACCTTGTTGAAGATGAAGAAGATCTTCTACCAGAGAACTTAGCTACAAAATTGTCTTGGGATGTTACGGAAGAAAAAAGTGTGAACAACCAATCTTCAGCCATTGAAGATCCCTTAATTGAATCCATTAGTAGTCTCCAGGCTGTCCAGGAGGCACTTCAAGAAGAACTCCAAAAATTCAGGGAGATTGAGGTTGAAGCCATTTCACCAGATGATGACTCAGCCAAGTGTAGCAGTGCATCTGCTGGTATTACTACTTTTCATGTTGGACATAATAAGTCAAGCCAATCTGTTCAGTCTGGTGCAGAAGAAATTAAACAAACTGCTTCAAGTTCCTTGGATCCTCAGGTATTGAGCCTGACACAAAATATAAATATTTTGGAAAGCAAGTTGGAGGAATTACAGGGTGAGCTTGCTCTGAAGGACTCCAGGATTGCTGAACTCGAAACATCCTTGAGTAGTGGTAAGATTTCTAGGGAAGAATCTGCTAGCACCGCAGGTTTGTCGGACAAAAAATGTAAAGGGGTTGAGTCTGAGCTGGAGGCCCTTTTTATGCTAAAGATTGAAGCTGAGGTTGAATACCTAGCCATCTCAAAGGTAATGCAGAACTTGAAGGATGGGGCAAGTTTGCAACAGACATTATTGGAAGAACAAGAGAAACTTTCTGAAAGTCAAGCGCAGGTTCTTGACAAAGTTGTAGATGCAGAGAGTAAGGCTTCAGTGCTGAAGAACAAAGCAGAAGAGTTGGAAAAATATTGTGGTGATAGTGTAGTAGTTGAGGAGTCTTTTGTGCTGCAGAGAAGAGTATGTAAGGTGACATTTTATCTTTTCATACAGTTTATGTTTTTAGTTTTGTTCTTTTGGCTTTTCATGTCACAGTTATCACCCAATTCTGGGATGGTTGTACCCACTTAG 1764 0.4161 MDLGNEYVEENEVNHDENGNGGSYGNDKFDLGFEGNSDVNGLDRKGTGVEVEVGSGEGENSKGTPTKGFGLRKWKRIRRNVVKDPNSSVDSGKALKRGLSGNANLSENQPFLRDVKERSDGSSNMFGNVVFSDGNVIHGSSSDSRYAHGSGFVVGTDSENSEDRSSKSSTAASEPNLSLEKSRSRNVNSKHLANSAQRVQQGKGRTESSKKPGEGGRVKIEKENSFSSLESDSRSSNFRQGVFTVTSNGKHSGRPNVYDGINSGEAHTNEHFTEGVEASYGNENLVEDEEDLLPENLATKLSWDVTEEKSVNNQSSAIEDPLIESISSLQAVQEALQEELQKFREIEVEAISPDDDSAKCSSASAGITTFHVGHNKSSQSVQSGAEEIKQTASSSLDPQVLSLTQNINILESKLEELQGELALKDSRIAELETSLSSGKISREESASTAGLSDKKCKGVESELEALFMLKIEAEVEYLAISKVMQNLKDGASLQQTLLEEQEKLSESQAQVLDKVVDAESKASVLKNKAEELEKYCGDSVVVEESFVLQRRVCKVTFYLFIQFMFLVLFFWLFMSQLSPNSGMVVPT 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01976 587 MobiDBLite consensus disorder prediction 154 203 - -
Cca10g01976 587 MobiDBLite consensus disorder prediction 1 120 - -
Cca10g01976 587 MobiDBLite consensus disorder prediction 142 234 - -
Cca10g01976 587 MobiDBLite consensus disorder prediction 204 228 - -
Cca10g01976 587 PANTHER WPP DOMAIN-INTERACTING PROTEIN 2 40 587 IPR044696 -
Cca10g01976 587 Coils Coil 326 349 - -
Cca10g01976 587 PANTHER WPP DOMAIN-INTERACTING PROTEIN 2 40 587 - -
Cca10g01976 587 Coils Coil 515 535 - -
Cca10g01976 587 Coils Coil 400 434 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01976 - - gmx:100794612 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01976 10 37703204 37707756 Cca10g01976 10 37703204 37707756 ECH