Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01972 ATGCAGGCTCGGCAACGCAGTCCGAGAGGGTTTTACGCCTCGGACTACCGCCACCGTGAGGCGGGGCTCGGGAGAGGCCGGCGAGGCGATGTTTTCGTCGAGGCGGGGCGGCTCGCGGCGGAGTATTTGGTTTCCCAGGGGCTGCTGCCGCCCAACGCGCTGCCGCCCAAGTGGCAGAACCACAAGACGCCGGCGGAGCGGCCGTCGGCGTTGGCGCGGCTCGGGAGCATGGACGGGAGGAGGAAGCTGGGGTTTGAGGAGTTCGGGCAGAAGGGGAGGAGGAGGGGCAGTTTCAGTAGGAGCAATGGGTTGGATTGGGGGAGGGAGTATAGAAGAAATGGGTCTTGGTCTGATCGGTTTCGCGGTGCTTCGgatgttaaggatggtgaggatgatgattatgatggtggtgGATTTAGTGTTAGACACCAAGATGAGGAGGATCAGTACCAGTACCAGCACCAccagccccagccccagccccagccccagcAACAAGAAGTTAGTCGTGTTGATGATTCTTCGATGAAATCGAATTCGAGTGAATTTGTGCCCAGAAGTGAGGATGGAGGTGATTTGAGTGACAAGGATAAGGATAGGGATAGGGCGAATGCTGAAATGTTGGAGGTGAAGCAGAGTGATGGAGGGAAAGATGTGGTTGATGTGGATATGGAAGGTGGTGCTGGTAATGATTTGGAGAGTGCGAGTGTTGGGGTTAAGGAGATGAAGGATGGTGATGGTGATAACGATAATGAGAAATTGAGGAATTTGTCTACCCAGTTGAGTGATCAGGAGAATAGTAGCTCTGGTGGGGTTGTTGCTGATTTAGTTTCGCTGTGCAAGTCTGTTAAGGTGCCCACAAAGACGCGCTCTTCAGTTACGCGCAAGAATTTGAAGGCTGGTAATAATAGAGATGGGACTGGGAGTGCACAAGATGTTGGGGGTCTTCAAGGAGCTGAGGAAGTGTTGGCTGAAAATGAGTCTGTTAAAGGCTCCTCCCCGGGTGATTTACTTGGTGAGAAAAGTTATGATATTGTGCATGTTGATGTGGATGTTGCTGAGGTAGAACCTGTTCATGCTGCTGAGGACGTGAAAGAATTAGATGCTGAGTGTAAAGCTGAGGAAGTTCAATCTGGTCAGGATAGAGGTTTTATGCAGGATAACAACCTAGAGTCTAGTGCTAATGCTACACTACCGGAGTATGGAAGTTGCAGTTCCTTAGCTGAGGAACGTGGTGAAAAGCGTGTTGCGGAAGCTGATGACGATGTGAGGGAGGACAACAAGAGACTCAGAGAATGGTTACCTTCCCTTGTCCCTAAGACTGAGGGGTACTTTCTGCATAGTGACCCTATTGAAGTGAAAGAGAGCCCGGGAGAAGATGAAATTTCACATATTGACAAAGTGACCATGACTTCTGATCGAGGGAGTCTGATAAGTAGTGGTTCTCAGTTCACAGAAGGTGGAGATAGACCTTTTCTTCAATGTTCAGAGGAGAAGCCACTGATGCCGAATTCATTTAGAACTTGTGATCTGAATCTCATTGAAGCATCTGAAATGCATGAAAATCATGTTGATCATCCGGTTCTTATTTACCCCCCTGCAGTTTCTGAAACCAAGAAAGCTGTGCCAATAGGCATAGATCTGAGCATGAGTCATGCTAGTGTATCAGGCAAATTCAATACTCATGCAACAAATGGCAAAGAGATTGAAGTAATTGATTTAGAAAATGATTCCATTCAAGAAGAGAAGTCAATTGACAACATGGATAGGAAGACAGAGACAATGTTTACTGGTCTTGAAGGTTTTTCCAACCATGCTCAAAATGCTGCTGACATACATGATGCTCAAGATGGATACGGGCTTATGATATCAGAATTGCTTGGGCCAGATTTCACTAACTGTTCTTCAGTACCTGGTGACATGAGCACTGTGCACAGTGAAATGGGCCTTCATAGTGGAGCGGGGACACTTGCTGAGGATGATTCCATATACATGTCGCTTGGAGAATTAAGTATGCCAGATTTTTATTAA 2031 0.4613 MQARQRSPRGFYASDYRHREAGLGRGRRGDVFVEAGRLAAEYLVSQGLLPPNALPPKWQNHKTPAERPSALARLGSMDGRRKLGFEEFGQKGRRRGSFSRSNGLDWGREYRRNGSWSDRFRGASDVKDGEDDDYDGGGFSVRHQDEEDQYQYQHHQPQPQPQPQQQEVSRVDDSSMKSNSSEFVPRSEDGGDLSDKDKDRDRANAEMLEVKQSDGGKDVVDVDMEGGAGNDLESASVGVKEMKDGDGDNDNEKLRNLSTQLSDQENSSSGGVVADLVSLCKSVKVPTKTRSSVTRKNLKAGNNRDGTGSAQDVGGLQGAEEVLAENESVKGSSPGDLLGEKSYDIVHVDVDVAEVEPVHAAEDVKELDAECKAEEVQSGQDRGFMQDNNLESSANATLPEYGSCSSLAEERGEKRVAEADDDVREDNKRLREWLPSLVPKTEGYFLHSDPIEVKESPGEDEISHIDKVTMTSDRGSLISSGSQFTEGGDRPFLQCSEEKPLMPNSFRTCDLNLIEASEMHENHVDHPVLIYPPAVSETKKAVPIGIDLSMSHASVSGKFNTHATNGKEIEVIDLENDSIQEEKSIDNMDRKTETMFTGLEGFSNHAQNAADIHDAQDGYGLMISELLGPDFTNCSSVPGDMSTVHSEMGLHSGAGTLAEDDSIYMSLGELSMPDFY 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01972 676 MobiDBLite consensus disorder prediction 237 253 - -
Cca10g01972 676 MobiDBLite consensus disorder prediction 288 338 - -
Cca10g01972 676 MobiDBLite consensus disorder prediction 50 271 - -
Cca10g01972 676 MobiDBLite consensus disorder prediction 288 310 - -
Cca10g01972 676 MobiDBLite consensus disorder prediction 79 94 - -
Cca10g01972 676 MobiDBLite consensus disorder prediction 105 152 - -
Cca10g01972 676 PANTHER PROTEIN, PUTATIVE-RELATED 8 672 IPR040276 -
Cca10g01972 676 MobiDBLite consensus disorder prediction 254 271 - -
Cca10g01972 676 MobiDBLite consensus disorder prediction 153 185 - -
Cca10g01972 676 MobiDBLite consensus disorder prediction 188 221 - -
Cca10g01972 676 PANTHER PROTEIN, PUTATIVE-RELATED 8 672 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01972 - - gmx:100781339 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01972 10 37641153 37644050 Cca10g01972 10 37641153 37644050 ECH