Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01964 ATGGCTGGGATTGATGATAATGTTGCCCTTACTGGCGATTGGGGTCTTCCTAGCCCAAGTCCAAGGACCTTTTTTTCTAGAATGTTAGATGAAGATAATGTGACAAGATCAATCTCAGAACATTCTGGAAATGGTAGAACTGGGGATCTCTTTTTGGGCATTCGCGACCCTAGCGAGACAGGGAAAGGAAACATGAAAGATGGGGCACAAGACGGTGATTCTAGGGCCCAATTGAGCGAGCAGAAGTCGAGCTCTCGGGGTGGTCTTGTTGAAAGAATGGCTGCTAGAGCTGGGTTCAATGCTCCAAGGTTGAATACAGAAAGCATTAGATCTACTGACCTTTCACTTAATTCTGACATTCAGTCTCCTTACTTGACCATCCCACCTGGTCTCAGTCCTACTACACTTTTAGATTCTCCGGTTTTCCTTGCAAATTCACTGGCACAGCCTTCTCCAACAACTGGAAAGTTCCTGTTCATGTCAAATAGCAACATGCGGAACTCAGAATTACCATCTGATGCTCTAGAAAAATGTAAAGATAATGGCTTTGATATGTATACATCATCATTTGCTTTCAAGCCCGCAACAGATTCAGGCTCCTCTTTTTATCACGGGGCTGGAAGAAAGATAAATCCAACTACAATTCCTCAACAATCCCTTCCTGGTATTGAGGTTTCGGCTCAGTCAGAAAATTCTTTTCAATCTCAAAGTGTTGATGCGGTCAAAGTTCAAACTGAGAACAAAAGTGGCCTTCATCTTCAGGCAGACTTTGGCGAATCGCCTCCTCAAAATGATAATGGAAGTAAAATGTTCTCAGCTGATCAAATGGCTTTCGATGCTGCTGGTGGCAGCACTGAACATTCTACACCAATTGAAGAGCAAGCAGATGAAGAAGGGGATCAAAGAGTCAATGGAGACTCAATGTCTGGTGGTGTTGGTGGTGCACCTTCTGATGATGGATATAATTGGAGAAAATATGGCCAAAAGCAAGTTAAGGGAAGTGAGTACCCTCGAAGTTACTACAAGTGTACACATCCAAACTGTCAGGTTAAGAAGAAAGTTGAGCGATCTCATGAGGGCCACATAACCGAGATCATCTACAAGGGAGCGCACAACCATCCAAAACCTCCTCCAAATCGCCGGTCAGGTATAGGTTCAGTTAACCTTCAGACTGACATGCAAGTGGACAACCCTGAACATGTTGAACCACAAAATGGTGGTGATGGTGACCTTGGCTGGACTAATGTACAAAAGGGAAATATAGCTGGAGCTGCTAATTGGAAACAAGATAACCTTGAAGCAACATCATCAGCATCTGTTGGCCCTGAATACTGCAACCAGTCCACCAATTTGCAGACTCAAAATGGTACTAACATTGATTCAGGAGAGGCAGTGGATGCTTCATCTACTTTTTCCAATGAAGAAGATGAAGATGATCAAGGCACTCATGGTAGTGTATCACTAGGCTATGATGGGGAAGGAGATGAATCTGAGTCCAAGAGAAGGAAACTGGAATCATATGCAGAGTTGAGTGGAGCTACTAGAGCCATTCGCGAACCTAGAGTTGTTGTACAGACTACCAGTGAAGTAGATATCCTTGATGATGGTTATCGATGGAGGAAATATGGGCAAAAAGTTGTCAAAGGAAACCCCAACCCAAGGAGTTACTACAAGTGCACGAATGCAGGGTGCACAGTGAGGAAGCACGTGGAGAGAGCATCACATGACCTAAAATCTGTGATCACAACTTACGAGGGAAAGCACAACCATGATGTTCCAGCTGCACGTGCAAGCAGTCATGTCAATGCTAATGCATCCAACGCCGTTTCCGGCCAAGCCTCTGGTGTTCTTCAGAACCATGTTCATAGACCTGAACCATCTCAAGTTCACAATGGCATTGGAAGGCTTGAGAGGCCTTCCCTTGGCTCATTCAACCTACCTGGGAGGCAGCAGCTAGGACCTTCCCATGGCTTCTCCTTTGGTATGAACCAAACCATGCTATCGAATTTTGCGATGTCAGGGTTAGGCCACGCGCAAGCGAAGCTTCCTATCATGCCTGTTCATCCATTCTTGGCacagcagcagcagcaacaacaacatcaacatcaacatcGCTCTGCAAATGATTTGGGTTTCATGATGCCAAAGGGAGAGCCAAACATGGAGACTATTCCTGAACGTGGCCTTAACCTGTCTAGTGGTTCATCAGTGTACCAAGAAATTATGAGTCGCATGCCTCTTGGACCTCATATGTAA 2256 0.4433 MAGIDDNVALTGDWGLPSPSPRTFFSRMLDEDNVTRSISEHSGNGRTGDLFLGIRDPSETGKGNMKDGAQDGDSRAQLSEQKSSSRGGLVERMAARAGFNAPRLNTESIRSTDLSLNSDIQSPYLTIPPGLSPTTLLDSPVFLANSLAQPSPTTGKFLFMSNSNMRNSELPSDALEKCKDNGFDMYTSSFAFKPATDSGSSFYHGAGRKINPTTIPQQSLPGIEVSAQSENSFQSQSVDAVKVQTENKSGLHLQADFGESPPQNDNGSKMFSADQMAFDAAGGSTEHSTPIEEQADEEGDQRVNGDSMSGGVGGAPSDDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCQVKKKVERSHEGHITEIIYKGAHNHPKPPPNRRSGIGSVNLQTDMQVDNPEHVEPQNGGDGDLGWTNVQKGNIAGAANWKQDNLEATSSASVGPEYCNQSTNLQTQNGTNIDSGEAVDASSTFSNEEDEDDQGTHGSVSLGYDGEGDESESKRRKLESYAELSGATRAIREPRVVVQTTSEVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTNAGCTVRKHVERASHDLKSVITTYEGKHNHDVPAARASSHVNANASNAVSGQASGVLQNHVHRPEPSQVHNGIGRLERPSLGSFNLPGRQQLGPSHGFSFGMNQTMLSNFAMSGLGHAQAKLPIMPVHPFLAQQQQQQQHQHQHRSANDLGFMMPKGEPNMETIPERGLNLSSGSSVYQEIMSRMPLGPHM 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01964 751 SUPERFAMILY WRKY DNA-binding domain 316 376 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca10g01964 751 MobiDBLite consensus disorder prediction 438 469 - -
Cca10g01964 751 SMART WRKY_cls 317 375 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca10g01964 751 SMART WRKY_cls 533 592 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca10g01964 751 Gene3D WRKY domain 311 377 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca10g01964 751 MobiDBLite consensus disorder prediction 438 504 - -
Cca10g01964 751 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 73 701 - -
Cca10g01964 751 Pfam WRKY DNA -binding domain 534 590 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca10g01964 751 Pfam WRKY DNA -binding domain 318 374 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca10g01964 751 ProSiteProfiles WRKY domain profile. 528 593 IPR003657 GO:0003700|GO:0006355|GO:0043565
Cca10g01964 751 Gene3D WRKY domain 520 586 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca10g01964 751 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 73 701 IPR044810 GO:0003700
Cca10g01964 751 MobiDBLite consensus disorder prediction 36 90 - -
Cca10g01964 751 SUPERFAMILY WRKY DNA-binding domain 525 593 IPR036576 GO:0003700|GO:0006355|GO:0043565
Cca10g01964 751 MobiDBLite consensus disorder prediction 397 416 - -
Cca10g01964 751 MobiDBLite consensus disorder prediction 1 21 - -
Cca10g01964 751 MobiDBLite consensus disorder prediction 280 323 - -
Cca10g01964 751 ProSiteProfiles WRKY domain profile. 318 376 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01964 Cca-Chr10 37494219 37499204 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01964 1 746 WRKY Transcription Factor Family AT5G56270 49.352 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Cca10g01964 WRKY 3.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01964 K18835 - gmx:100796545 1313.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01964 10 37494219 37499204 Cca10g01964 10 37494219 37499204 ECH