Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01905 ATGGCCGCCGAAGTCATCAACGTGCCGCCCGAATCTCTCGACCAGTCTCcctccgcctccgccgctcctcctcccgacgctgctccgcccgacgacgatctccctgcgccgccgcttccgcctccgccgcgccgccgggaccgccgggacgaccgcgacctcgaccgccaccCGAATCGCGGCCGCGGGAGCGATTACTACGACCGCGAGAGGGACTTCAAGcgccgccgcagccctagcccgggctaccgcgaccgccgctactctccgccgcctccgtcgcgccgttcgcctccgccgTACAAACGATCTCGGAGGGGCAGTCCTCGCGGCTACGGACCCGATGACAGCAGATTTGGCTATGATTATTTTGGTGGTTATGAACGGGGTGTGGGTGGAAGGACTGGTTATGCAGATGAGAAGTCTTATGGCAGGCTTGCACATAGATCTGCTGGGGGATATCATAATGGAATTTCTGATGTGGATATAAGTCGCGGTTATGCAGATTTACCAAGTGGAGGTGGACAAAGAGAAGGGTTGATGTCTTATAAACAATTCATTCAGGAGCTTGAAGATGATGTACTGCCAGCTGAAGCTGAGCGTAGGTATCAAGAGTACAAATCAGAGTACATTTCTACTCAAAAACGTGCTTATTTTAATGCTCATAAGGATGAGGAGTGGTATGGGTTAAAAGATAAATATCATCCAACAAATTTACTTGCAGTAATTGAAAGGAGGAATGAAAATGCTCGACGGCTTGCAAAGGATTTTTTGCTTGATTTGCAAAGTGGAACACTAGACCTAAATCCTGGTATGAACTCTTCATCCAGTAAATCAGGGCAAGTCAGTGAGCCTAATTCAGAGGAAGAAACAGATGCTGGCACTAAACGAAGAAGACATGGTAGGGGACCTAATAAAGATAATGATTTCTCAGCTGCACCGAAGGCTCACCCTATCAGTTCTGAACCTAGACGCATACAAGCAGACATTCAACAGGCTCAGGCTGTTGTTCAAAAGCTTGACATGGAAAAGGGTATTGAAGATAATTTTTTATGCACCAGTGACCACAATAAAAATGATGATAAGGCTCACAGTGGATCTGTGGGCCCCATAATAATTGTCCGGGGTTTAACATCTGTTAAGGGCTTAGAGGGTCTTGAGCTACTAGACACTCTTATTACATATCTTTGGAGGATTCATGGTGTTGATTATTATGGAATGATCGAGACTAATGAGGCCAAGGGTTTTAGGCATGTGAGGCCAGAAGGAGCAGGGCATGAAGAAATAAACAAATCCGGGTCTGAATGGGAGAAGAAACTGGATTCATTTTGGCAGGCAAGGTTGAATGGTCAGGATCCATTGGAAGTGATGGCTGCCAAGGAGAAGATAGATGCTGCAGCAGCTGATGTGTTGGATCCATATGTAAGAAAAATTAGGGATGAAAAATATGGCTGGAAGTATGGTTGTGGAGCTAAGGGCTGCACAAAGCTTTTTCATGCAGCTGAATTTGTATACAAACATTTGAAGCTAAAACACCCAGAGCTTGTGATGGAACTAACATCAAAATTGCGTGAGGATCTTTATTTTCAAAACTACATGAATGATACTAATGCTCCCGGTGGAACACCTGTCATGCAGCAATCTCAGAAGGATAAGCCTCTAAAGCGAAGGTTAGGTTTGGGTTTGGAAGGTCGATTGAAAGATGATCGGGGTAACCGACGAGACCAGGACAGGAGTGACAGATTGAATGGAGACAATTCTCCATCCCATGATGAAGCAATGTATGATGCATATGGAGGGCCTGGTGTACCTCCATTTACCTCAGATATGCCCCCTCCCCCACCAGTTTTGATGCCGGTACCTGGCGCAGGGCCTTTGGGACCCTTTGTCCCTGCACCACCAGAAGTTGCAATGCAGATGCTAAGGGAACAAGGAGGACCTTCGTCGTATGATGGCTCAGCAAGGAAGATGCGATCTGGTCCTCATATGGGTGGACCAGCTCCTATAATTGCTGTTCCTCCAACCTTTAGACCTGATCCTCGACGGATGCGAAGTTATCAAGACCTGGATGCCCCAGAAGACGAAGTCACTGTGATAGACTATCGGAGCTTGTAG 2115 0.4113 MAAEVINVPPESLDQSPSASAAPPPDAAPPDDDLPAPPLPPPPRRRDRRDDRDLDRHPNRGRGSDYYDRERDFKRRRSPSPGYRDRRYSPPPPSRRSPPPYKRSRRGSPRGYGPDDSRFGYDYFGGYERGVGGRTGYADEKSYGRLAHRSAGGYHNGISDVDISRGYADLPSGGGQREGLMSYKQFIQELEDDVLPAEAERRYQEYKSEYISTQKRAYFNAHKDEEWYGLKDKYHPTNLLAVIERRNENARRLAKDFLLDLQSGTLDLNPGMNSSSSKSGQVSEPNSEEETDAGTKRRRHGRGPNKDNDFSAAPKAHPISSEPRRIQADIQQAQAVVQKLDMEKGIEDNFLCTSDHNKNDDKAHSGSVGPIIIVRGLTSVKGLEGLELLDTLITYLWRIHGVDYYGMIETNEAKGFRHVRPEGAGHEEINKSGSEWEKKLDSFWQARLNGQDPLEVMAAKEKIDAAAADVLDPYVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHPELVMELTSKLREDLYFQNYMNDTNAPGGTPVMQQSQKDKPLKRRLGLGLEGRLKDDRGNRRDQDRSDRLNGDNSPSHDEAMYDAYGGPGVPPFTSDMPPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGPSSYDGSARKMRSGPHMGGPAPIIAVPPTFRPDPRRMRSYQDLDAPEDEVTVIDYRSL 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01905 704 MobiDBLite consensus disorder prediction 644 690 - -
Cca10g01905 704 MobiDBLite consensus disorder prediction 534 604 - -
Cca10g01905 704 MobiDBLite consensus disorder prediction 265 325 - -
Cca10g01905 704 Pfam SERRATE/Ars2, N-terminal domain 184 268 IPR021933 -
Cca10g01905 704 MobiDBLite consensus disorder prediction 550 587 - -
Cca10g01905 704 PANTHER ARSENITE-RESISTANCE PROTEIN 2 3 704 IPR039727 GO:0006397
Cca10g01905 704 MobiDBLite consensus disorder prediction 289 306 - -
Cca10g01905 704 ProSitePatterns Zinc finger C2H2 type domain signature. 489 512 IPR013087 -
Cca10g01905 704 PANTHER SERRATE RNA EFFECTOR MOLECULE-LIKE PROTEIN 3 704 - -
Cca10g01905 704 MobiDBLite consensus disorder prediction 534 549 - -
Cca10g01905 704 Pfam Arsenite-resistance protein 2 430 600 IPR007042 -
Cca10g01905 704 MobiDBLite consensus disorder prediction 22 41 - -
Cca10g01905 704 MobiDBLite consensus disorder prediction 266 288 - -
Cca10g01905 704 MobiDBLite consensus disorder prediction 1 125 - -
Cca10g01905 704 MobiDBLite consensus disorder prediction 42 83 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01905 83 704 C2H2 Transcription Factor Family AT2G27100 62.769 0.0 734
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01905 - - gmx:100817569 1073.54