Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca10g01904 | ATGGGAAGAAGACGAAACGGCCAAGAAACCCTCCGTCGTCGAGTGGAGTCCCTCTACCCTTCCTCCGACCAAACCACGCACCGTACTACCGACCAAATTGTTCAACGTCTTCGTTCAACCTACCCTGATTACCGCCGAATCAAGCACCATGCTCTATTTCGATTGGTCCACGAAGCTCTTCTACCCTCACACGGTAACGACGACGAGCAACTTCTTCAACCCTCACGGAAGAGGCGCAGCACCTCTTCCGAGAGTGACGCCGACAACGGCACTCCATCGGAGCTTTCGTTCGACCTTACCAAGACAATGCTGCGGAATACGTATTTGGGGATGCAGGAAAAGAATGTTGGCTCTGTGAATGAAACTGAAACCACGTTGAAGTCGTCCAGGAAGCGATTGAAGGGTGATGGTGATGATGAGAAGGTGAAGGGGATAGGGTTTAGCGATTTGGGTGGGATTAAGAAGATTAGGAAGGAACTTGATGTGTTGCTGTTGCCGTTTTACCAGCCCCAGGTGGCTAGAGATTTGGGAATGAGTCCCACATCGGGCATTTTGTTGCATGGACCTCCTGGCTGTGGAAAGACTAGACTGGCTCATGCTATAGCTCATCAAACTGGATTCCCTTTTTATCAAATTTCACCTGCCCAAGTGGTGTCTGGAATCTCAGGTGAATCTGAACAGAATATTAGAGATATTTTCTCTAAAGCACACAGGACTGCCCCATCAATTATATTTATTGATGAGATTGATGCAATTGCTTCAAAAAGAGAGGATTTATCGCGCGAGATGGAGAAACGAATTGTCACCCAGTTGTTGACATCCATGGATCAACCGGATAATAACAGCAATGTTCTTGTTATTGGAGCTACTAATAGGCCCAATGTCATTGACTCTGCCCTTAGGAGACCTGGAAGATTTGATCGTGAGATTTATATTGGCATGCCTGATGAATCTGCCAGGGAGGAGATCCTTTCCGTTCTTACTCGCAATGTTAAACTTCAGGGTCCCATTGATCTATTAAAGATAGCTAAATCTACATCAGCATTTGTTGCTTCTGATTTGAAGAGTGTGATCAGTCATGCTGGTTCATTGGCCATGAAGAGAATAATTTATGAAAGGTATACCACAGCAGAGCCTCCAGAGGACTGTTTTAGTGAACCTTGGTCGCCAGAAGAAGTGGACAAGGCTGCCATCACAATGTCTGATTTGGAGGAAGCAGTCAAAATGGTGCAATCTTCAGAAAGAAGAGAAGGGTTCAATCCCATTCCTGATGTAAAATGGGAAGATGTTGGTGGGCTTGATCTCTTAAGAAACGAGTTTGATGACTATATCATAGGGCCTATAAAATGTCCAGGTGATTATGAGGGATTTGGGCTAGATCTTTCGACAGGATTTTTGCTTTATGGACCTCCAGGTTGTGATAAACCACTGGTTGCCAAAGCTGTTGCCAATGCTGCAGGAGTTAGTTTCCGTCATATTAAGGGACCTGATATTCTAAATGAATATGTTGGAGTAAGTGAGAATAATGTTCGGAAAATCTTTGATGCAGCAAGGACATGTGCACCTTGCATACTATTTTTTGATGAGTTGGATGCGTTGACAACCACACGTGGAAAAGGTAAAGAAGGTGCATCAGTCACTGATCGAGTATTGAACCAGTTGCTCATTGAGTTAGATGGTGCAGAGCATCGGAAAAATGTTTTTGTGATTGGAGCAACAAATAGGCCTGAGGTAATTGATCCTGCTCTTTTACGGCCTGGCAGGCTTGGTAGACTTGTTTACGTTCCTCTCCCAAGTCCAGACCAGCGAGTTTTAATATTAAAAACTCTTGCAAGAAAGTATCCTATTGATGACAGTACAGATTTGAGTGCCATAGGAAGATCGGAGGCTTGTGAAAATATGAGTGGTGCTGATCTTGCTTTATTGATGGAAGAAGCAGTAATGACAGTTGTTAGAAAGAATAGGACCTCAAACCATGGCAAGGAGATGACCATCAAGCCATGGCATATAGAAGAAGCACTGACTAGAGTCTTTCCCTCTGTGTCTGACAAGCAAAAGCAGTACTACCAGCGTTTGTCAGAGAGGTTTAGCCCTTCCTTCCACAGAAATGTAAGGGAATGA | 2121 | 0.4446 | MGRRRNGQETLRRRVESLYPSSDQTTHRTTDQIVQRLRSTYPDYRRIKHHALFRLVHEALLPSHGNDDEQLLQPSRKRRSTSSESDADNGTPSELSFDLTKTMLRNTYLGMQEKNVGSVNETETTLKSSRKRLKGDGDDEKVKGIGFSDLGGIKKIRKELDVLLLPFYQPQVARDLGMSPTSGILLHGPPGCGKTRLAHAIAHQTGFPFYQISPAQVVSGISGESEQNIRDIFSKAHRTAPSIIFIDEIDAIASKREDLSREMEKRIVTQLLTSMDQPDNNSNVLVIGATNRPNVIDSALRRPGRFDREIYIGMPDESAREEILSVLTRNVKLQGPIDLLKIAKSTSAFVASDLKSVISHAGSLAMKRIIYERYTTAEPPEDCFSEPWSPEEVDKAAITMSDLEEAVKMVQSSERREGFNPIPDVKWEDVGGLDLLRNEFDDYIIGPIKCPGDYEGFGLDLSTGFLLYGPPGCDKPLVAKAVANAAGVSFRHIKGPDILNEYVGVSENNVRKIFDAARTCAPCILFFDELDALTTTRGKGKEGASVTDRVLNQLLIELDGAEHRKNVFVIGATNRPEVIDPALLRPGRLGRLVYVPLPSPDQRVLILKTLARKYPIDDSTDLSAIGRSEACENMSGADLALLMEEAVMTVVRKNRTSNHGKEMTIKPWHIEEALTRVFPSVSDKQKQYYQRLSERFSPSFHRNVRE | 706 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca10g01904 | 706 | Gene3D | - | 125 | 313 | IPR027417 | - | |
Cca10g01904 | 706 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 140 | 408 | IPR027417 | - | |
Cca10g01904 | 706 | MobiDBLite | consensus disorder prediction | 64 | 97 | - | - | |
Cca10g01904 | 706 | PANTHER | AAA-FAMILY ATPASE | 32 | 695 | - | - | |
Cca10g01904 | 706 | Gene3D | - | 598 | 675 | - | - | |
Cca10g01904 | 706 | CDD | AAA | 180 | 313 | - | - | |
Cca10g01904 | 706 | Pfam | Nucleolin binding domain | 7 | 60 | IPR031996 | - | |
Cca10g01904 | 706 | Gene3D | - | 423 | 689 | IPR027417 | - | |
Cca10g01904 | 706 | Pfam | ATPase family associated with various cellular activities (AAA) | 466 | 596 | IPR003959 | GO:0005524|GO:0016887 | |
Cca10g01904 | 706 | Pfam | ATPase family associated with various cellular activities (AAA) | 184 | 313 | IPR003959 | GO:0005524|GO:0016887 | |
Cca10g01904 | 706 | MobiDBLite | consensus disorder prediction | 15 | 29 | - | - | |
Cca10g01904 | 706 | ProSitePatterns | AAA-protein family signature. | 284 | 302 | IPR003960 | GO:0005524|GO:0016887 | |
Cca10g01904 | 706 | Gene3D | - | 315 | 417 | - | - | |
Cca10g01904 | 706 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 423 | 695 | IPR027417 | - | |
Cca10g01904 | 706 | PANTHER | NUCLEAR VALOSIN-CONTAINING PROTEIN-LIKE | 32 | 695 | - | - | |
Cca10g01904 | 706 | SMART | AAA_5 | 180 | 316 | IPR003593 | - | |
Cca10g01904 | 706 | SMART | AAA_5 | 461 | 599 | IPR003593 | - | |
Cca10g01904 | 706 | CDD | AAA | 464 | 597 | - | - | |
Cca10g01904 | 706 | MobiDBLite | consensus disorder prediction | 70 | 84 | - | - | |
Cca10g01904 | 706 | ProSitePatterns | AAA-protein family signature. | 567 | 585 | IPR003960 | GO:0005524|GO:0016887 | |
Cca10g01904 | 706 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca10g01904 | Cca-Chr10 | 36292353 | 36297731 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca10g01904 | 397 | 701 | Calmodulin-binding Proteins | AT3G56690 | 39.016 | 1.89e-60 | 218 |