Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01850 ATGGAATCACCGCATCCAGGTTCAAGAGGGGCAGAAGCACTTAAACAGATATCTCCTGGATCATCAATTTCTGTTGCATATCACCCACTTTTTGGACCTCATGATGACCTTCTCCTTCTAGAGCTTGATGAGAAGCTTCTCCCTGATGTTCTGCATGAAAGGGTGGTTCTGAGAGGACAGCCTGATGAAGATGCAGTTCTTTGTACTCAATCCAAAACATATGCGATGAAGTTTGTTGGAACTTCTAATTCTGTTCTGCTTGTACCACCAGCGAATCATTCAGAGTTTCATGAAAATCCACAAAAGAATGATACTAATAATGATGAAGAGAAAGTCATTGCACCGATAATCAAAATTGTATCTGGTAGTATGGAGCTTATTGAAGCAGCCCCTAGACTTGATAAACTTAAATCACTTCTGTCAGAAAAGCCTTATAATTTTGAGGAGTATGACGTGGGAAATTTAGAAGAGAATCGGGAATCTAGAATAGGGTTATATACTTGGAATGATCTAATAGAAAATATTCAAGCTAGTGATGAGGAATTAAGGTCTGGACTGCAGGCTCTTTCAGCGCTGGAGATTAATGGGTATTGGAGAGTAGTAGACGGGAATTACATGGACATGATTCTGGGAATGCTGTTGAAAAATTCAGTGTTGAATGACTGGTCACTTGATGCTTTAAATGAAGATGAAGTTGTGAACACACTGGAATCAGATGGATTTCCTGGGGTGCTTGCAAGGCATTGTTTGCATGTATTTGGCAAGCAAGTAAATGAGTGCAGGCATAGTGGTGTCTGGAAGTTGGATGAGAAGCGAGTATGCGTACATTTTGCAAGAGAAATCCTGAAAGGGGGCAAGAAGAAATTAGAGAGTTTCATGGATGAATGGAGGCAGAAGATTCCAGAGGGAATGCAGCCCACTTTTGATCTTGTGGAAGGAGAGGTATTAACAGAGAGAATTGGAGTTGAGACATGGGTTCGCGCCTTCAGTGTCGCTTCGTTGCCTTCCACTCCAGCTGAGCGTTTCTCCATTCTTTTCAGAGAGAGGCCAAAATGGGAATGGAAAGATCTGCAGCCCTATATCAGAGATCTGAATGTACCAGGTCTTTCTTCAGAAGGTTTGCTTCTCAAATACACTCGAAGGACACAACCATCACCTGACACAGAACCAGTTTTCAGTGCAAGATAG 1188 0.42 MESPHPGSRGAEALKQISPGSSISVAYHPLFGPHDDLLLLELDEKLLPDVLHERVVLRGQPDEDAVLCTQSKTYAMKFVGTSNSVLLVPPANHSEFHENPQKNDTNNDEEKVIAPIIKIVSGSMELIEAAPRLDKLKSLLSEKPYNFEEYDVGNLEENRESRIGLYTWNDLIENIQASDEELRSGLQALSALEINGYWRVVDGNYMDMILGMLLKNSVLNDWSLDALNEDEVVNTLESDGFPGVLARHCLHVFGKQVNECRHSGVWKLDEKRVCVHFAREILKGGKKKLESFMDEWRQKIPEGMQPTFDLVEGEVLTERIGVETWVRAFSVASLPSTPAERFSILFRERPKWEWKDLQPYIRDLNVPGLSSEGLLLKYTRRTQPSPDTEPVFSAR 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01850 395 Coils Coil 393 395 - -
Cca10g01850 395 Pfam Sister chromatid cohesion protein Dcc1 38 361 IPR019128 GO:0007064|GO:0031390
Cca10g01850 395 PANTHER SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 15 395 IPR019128 GO:0007064|GO:0031390
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01850 10 395 C3H Transcription Factor Family AT2G44580 59.694 7.47e-168 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01850 K11271 - gmx:100817511 687.182