Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01785 atgacttctgagtctgctagtcaaattgcacaaaaaattaatgtgttggaggagcaagaatcacaagaggttcagctggttgggcaggccttaaaaactttcattgcatggccgagacatcttgtCAGACCTATTTCAACCACGGATATTCATCGAGCAAataaacgagttccatctattgataggttaaaacccaatggtgatcctatcactgggttacgtgaggcatcaaagtccttactttatggacaaccatttcaggtgatatgtcctgcaacacaaccaaagaacctagattggatttatcccatgagtaatcaacaacaaggaggttacgaatgtggatattatgtgatgaattggatgtTAGACATAATTGAAGGCGAAGTAACAAATGATTGGATTGAGCTTTTTGATGATGTTGCACCATTGCCGGAAACCAAATTGGAAGACATTCGAAGTCAATGGGCAACTAAACCTGCCCATTTTCAGAGCAACAAAAAAATGGTGTTGATTGTGCATCGTGTATATCCTCCTATACTCAAGTGGATACTCTTAATTGCTCTACGCAGCCTTTCATCATTACTATCATATTTCATCTTTTTCAATGCTCGAGAATGCATGAAACCATCCTATGTATGTGAGGTGAGGGGTGAGAATAAGTTGAGTACGTTTACCGTTGTTGTAACGTGTGAGGTGAGGTGTCTCAGAAAGTATAATGCACACAATTCCAATGGACAAGTGCTTTCTCCAAATGCAACGTGTGAGATAATGTACTATCCGCAGCAGCAACAAGCTAAGAACATGCATGCTTTAAGGATGCATAACCCTACTGAGACGCATATGATGATGCATGGAGGCAATGGAACTGGTGATTTAGGACTTGTTCTTTCAACTGATGCTAAGCCTAGACTAAAATGGACACTAGATCTTCATGAACGGTTCATAGAAGCAGTCAATCAACTTGGAGGAGCAGACAAAGCTACACCAAAAACAGTATTGAAACTGATGGGGATTCCTGGACTTACTCTCTACCATTTAAAGAGTCATCTTCAGTTTAATTATGATAATGTTATGTACAGATTGCAATTCAAGTAG 1098 0.2769 MTSESASQIAQKINVLEEQESQEVQLVGQALKTFIAWPRHLVRPISTTDIHRANKRVPSIDRLKPNGDPITGLREASKSLLYGQPFQVICPATQPKNLDWIYPMSNQQQGGYECGYYVMNWMLDIIEGEVTNDWIELFDDVAPLPETKLEDIRSQWATKPAHFQSNKKMVLIVHRVYPPILKWILLIALRSLSSLLSYFIFFNARECMKPSYVCEVRGENKLSTFTVVVTCEVRCLRKYNAHNSNGQVLSPNATCEIMYYPQQQQAKNMHALRMHNPTETHMMMHGGNGTGDLGLVLSTDAKPRLKWTLDLHERFIEAVNQLGGADKATPKTVLKLMGIPGLTLYHLKSHLQFNYDNVMYRLQFK 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01785 365 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 261 352 - -
Cca10g01785 365 Gene3D - 301 364 - -
Cca10g01785 365 Pfam Myb-like DNA-binding domain 304 352 IPR001005 -
Cca10g01785 365 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 261 352 IPR044848 GO:0003700
Cca10g01785 365 SUPERFAMILY Homeodomain-like 301 352 IPR009057 -
Cca10g01785 365 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 302 353 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01785 Cca-Chr10 33278506 33281683 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01785 275 352 G2-like Transcription Factor Family AT3G24120 62.821 5.11e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Cca10g01785 Myb_DNA-binding 1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01785 - - ccaj:109818888 184.882