Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01775 ATGGAAGCCATTGCTCGGACAGTGTTACAAAAATTGAGCTCTTTCGCCCAAGAGGAGTTTGGAGTCATTTGGAACCTCCAAGATGATGTACAACGAATGAGGAGCACTGTGTCTGCAATAAAAGCTGTACTCCTGGATGCAGAAGCAAAGACTAACAACCTTCAAATCAGTAATTGGTTGGAGGAGTTGAAAGATGTACTTTATGACGCAGATGACTTGCTAGACGATCTCTCTACTGAAGCTTTGAAAAGAAAATTGATGGTTGGTAACAGCATCTTGAGAGAGGTACAGATTTTCTTCTCCTTCTCAaaccaaattgtctatggtcttaaattgggtcatggaatgaaagcaatccagaagaggctagaagacattgctaaaattaagatcacactgcagttgactgatcgccctttggagactccaattgcatatagggagcagagacaaacttactcttttgtgagtaaagatgaagtcatcgggagagaggaggaaaaggaatttcttaaaagttatttactagacaccaatgagacagtcaatgtttctgtagttcccataattgggattggaggactagggaagactacacttgctcaacttgtttataatgataatgctgtccaacgctattttcagcaaacaatgtgggtgtgtgtctcagaggaatttgacataaggaaaatagctcaaaagatgattgggagtgacaaggatagtgagattgagcaagtacagcaagatctcagaaacaaaattcgaaggaagaagtatctacttgtgctggatgacgtgtggaatgaggatcgtgaattgtggcttaagttgatgagtctactcatggaaggaggtaaagggagtatcataattgtaacaacacggagtaggaccgttgcaaaaataatgggcacacttccaccttttttcttaaaaggcctggatttggaaagatcttggaagctattctctcgagtggcttttgatgggggtgaagaaccaaatgatagggagttgttagccattggaaggggaattgttaaaagatgtgccggggttccccttgccataagaactattggcagcctcttgtattctcgtaacttgggccaaagtgattggttatattttaaggaagttgagttttcaaagatagatcaacagaaggacaaaatctttgcaatcctgaaactgagttatgaccatcttccttcatttttgaaaaactgttttgcttattgttcattgtttccaaaaggttttaagtttgacaagaagacacttattcagttatgggtagctgaggggttcattcaaccatcaaatgacaatagatgtgaagaagatgttggtcatgagtacttcatgaatttgctgtcaatgtcacttttccaagatgtaactatagatgattatggtgacgtaagtacttgtaaaatgcatgacctgatacatgatctagcaCAGCTAGTGGTTGGGAAAGAATATGCTATGGTTGAAGGAAAAAAAGGAAACATCGGAAACAGAATACGTTATTTGTCATCTCGTACATTATCACATTTTGCACAGACACCATCATCTTCCCACAAATTAAGGACATTTATTATTCTTGGCCAGCAACTTTATGGAAGCAAATGTTTGGATCTGTTACATTTTCATTTTTTTTTAAGCCTAAAGTGTTTACGGGTGTTAACACTTTGTGGGTTGGATATTGTAACAATTCCAACGAGTATTAAAGAGTTGAAGCATTTGAGATATCTTGATCTTTCAAAGAATCATTTTCTTTTAAATCTTCCACCAGATGTTTCTAGCCTACATAACTTGCAAACTCTAAAGCTTTCCCAATGTTTTAGACTCAAAGAGTTACCATCACATATGAACAAAAGTCTTAGGCATCTTGAATTGAATGAATGTGAGAGGATGACATGTATGCCATGCGGGTTCGGACAACTGACCAATCTTCAGACACTAACACATTTTTTAGTTGACAATAGAGAAGGATTTGAAATGAAACATATGCCAAATGGGTGGGAAGAGTCGGGCAATCCTCGAACACAAACACATTTTTTATTGGACCATACAGAGGGATCAGAAATAATGTGTATGCCATGTGGGTTGAGACATTTGACCTGTCTTCAAACACTACCACATTTTTTATTGGACTGTAAAAGTATAAGTGGTGGTATAAGGGAATTGAGCGGGCTAAACAGCCTTAGAGGGAAATTGGAAATTAAATGGTTGGATTCCCTGCGATATTATGCTGAAGAGGTCGAGTCTGCAAAGGTACTTCTTGATAAGCAACATCTTCAAGAACTGGAATTACGTTGGTGGAATGATGAGAATGAGGTTAGAAATCTACCATTATCGAAGTCTGAATTAATGTTTTTGGAGTTTCCTAGTGCAGACAGAAGAAAGTTCAATCAAGAATTTTGCGGTTGTGGGGAAGATGAGAATATTTTAGAAGGCCTCCAGCCACATGACTCAATTAAAAAACTAGTAATAGATGGATATTGTGGCCGAAGGTTACCAGACTGGATAGGGAATCTCTCATCACTCTTGAGTCTTGAAATCAACAATTGCAATGCTTTGATATCACTACCAGAAGGATTTCGTAACCTCATATCTTTAAAGCGGCTTCGCATATATAACTGCTCACTGTTAGAAATAAGATGTGCAAGAACAAATGGTGAAGACTGGCCAAAAATTGCTCACATCCCGAAAGTTTTGATCCCTCCCTTTACACCATCTTTATTCAGGTATTATACTTGA 2772 0.2226 MEAIARTVLQKLSSFAQEEFGVIWNLQDDVQRMRSTVSAIKAVLLDAEAKTNNLQISNWLEELKDVLYDADDLLDDLSTEALKRKLMVGNSILREVQIFFSFSNQIVYGLKLGHGMKAIQKRLEDIAKIKITLQLTDRPLETPIAYREQRQTYSFVSKDEVIGREEEKEFLKSYLLDTNETVNVSVVPIIGIGGLGKTTLAQLVYNDNAVQRYFQQTMWVCVSEEFDIRKIAQKMIGSDKDSEIEQVQQDLRNKIRRKKYLLVLDDVWNEDRELWLKLMSLLMEGGKGSIIIVTTRSRTVAKIMGTLPPFFLKGLDLERSWKLFSRVAFDGGEEPNDRELLAIGRGIVKRCAGVPLAIRTIGSLLYSRNLGQSDWLYFKEVEFSKIDQQKDKIFAILKLSYDHLPSFLKNCFAYCSLFPKGFKFDKKTLIQLWVAEGFIQPSNDNRCEEDVGHEYFMNLLSMSLFQDVTIDDYGDVSTCKMHDLIHDLAQLVVGKEYAMVEGKKGNIGNRIRYLSSRTLSHFAQTPSSSHKLRTFIILGQQLYGSKCLDLLHFHFFLSLKCLRVLTLCGLDIVTIPTSIKELKHLRYLDLSKNHFLLNLPPDVSSLHNLQTLKLSQCFRLKELPSHMNKSLRHLELNECERMTCMPCGFGQLTNLQTLTHFLVDNREGFEMKHMPNGWEESGNPRTQTHFLLDHTEGSEIMCMPCGLRHLTCLQTLPHFLLDCKSISGGIRELSGLNSLRGKLEIKWLDSLRYYAEEVESAKVLLDKQHLQELELRWWNDENEVRNLPLSKSELMFLEFPSADRRKFNQEFCGCGEDENILEGLQPHDSIKKLVIDGYCGRRLPDWIGNLSSLLSLEINNCNALISLPEGFRNLISLKRLRIYNCSLLEIRCARTNGEDWPKIAHIPKVLIPPFTPSLFRYYT 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01775 923 Pfam Rx N-terminal domain 6 86 IPR041118 -
Cca10g01775 923 Gene3D Ribonuclease Inhibitor 518 679 IPR032675 -
Cca10g01775 923 Coils Coil 60 80 - -
Cca10g01775 923 SUPERFAMILY L domain-like 480 889 - -
Cca10g01775 923 Gene3D - 315 400 IPR042197 -
Cca10g01775 923 PRINTS Disease resistance protein signature 186 201 - -
Cca10g01775 923 PRINTS Disease resistance protein signature 580 596 - -
Cca10g01775 923 PRINTS Disease resistance protein signature 254 268 - -
Cca10g01775 923 PRINTS Disease resistance protein signature 351 365 - -
Cca10g01775 923 Pfam NB-ARC domain 165 402 IPR002182 GO:0043531
Cca10g01775 923 PANTHER OS10G0130600 PROTEIN 8 676 - -
Cca10g01775 923 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 415 IPR027417 -
Cca10g01775 923 PANTHER DISEASE RESISTANCE PROTEIN RP 8 676 IPR044974 GO:0006952
Cca10g01775 923 CDD AAA 162 297 - -
Cca10g01775 923 Gene3D - 401 491 IPR036388 -
Cca10g01775 923 Gene3D - 146 306 IPR027417 -
Cca10g01775 923 Gene3D - 5 129 - -
Cca10g01775 923 Gene3D Ribonuclease Inhibitor 680 895 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01775 Cca-Chr10 32900810 32904443 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01775 180 496 WRKY Transcription Factor Family AT5G45050 25.740 1.03e-10 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01775 - - ccaj:109809163 1816.2