Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01770 ATGgacgacgacgacgagtccgaggaggacgaagaatatgaagaggatgacaatgaagaAAATGACCCCTCTCTCTCCGCCTCTGCCGCTCTCGTCGTTATTGTCGTTGTCCCCGGTTCCACCCGGTTGTGGACCGACGAAGACGAGATCGAGCTCCTGCAAGGCTTCCTCGACTACACCTCGCAGCGAGGATCCTCTCAACACAACGACACCGCTCTGTTCTACGACCAAATCAAGTCAAAGCTCCATCTCGATTTCAACAAGACATTGGCTGTGGCGAAGGAGGAGCTGGCTGTGACGAAGGAGGCGCTGCACGGTGGTTTCGACGTTGCTCTCGAGGAGGTCAGCAAGCGCGGCGGGGGCTTCGGGGCAGCGACGGAGGACAAGTGCGGGCGGGGAATTGGAGGGCGATGGTGGCGAATACGGCAGCACTGGCGAGGGTTTTGA 447 0.5213 MDDDDESEEDEEYEEDDNEENDPSLSASAALVVIVVVPGSTRLWTDEDEIELLQGFLDYTSQRGSSQHNDTALFYDQIKSKLHLDFNKTLAVAKEELAVTKEALHGGFDVALEEVSKRGGGFGAATEDKCGRGIGGRWWRIRQHWRGF 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01770 148 MobiDBLite consensus disorder prediction 1 22 - -
Cca10g01770 148 PANTHER BNAANNG10740D PROTEIN-RELATED 41 94 IPR007592 GO:0006355
Cca10g01770 148 PANTHER BNAANNG10740D PROTEIN 41 94 - -
Cca10g01770 148 MobiDBLite consensus disorder prediction 1 25 - -
Cca10g01770 148 Pfam Protein of unknown function, DUF573 41 92 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01770 Cca-Chr10 32723972 32724558 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01770 42 148 GeBP Transcription Factor Family AT3G04930 44.954 1.38e-18 79.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Cca10g01770 DUF573 2.8e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01770 - - gmx:100779712 97.8265