Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01739 ATGGCAGCAGAGGTAACTGGTGGGGCATTTCTCTCAGCCTCCCTTCAAGTGACTTTTGACAAGTTGGCTTCACGTGAGATCAAGGATTACTTCCAAGGAAGGAAACTCAAAGATGAGACGCTCAAAAAGCTAGATTTTGCGTTGAACTCTATCAACCAAGTGCTGGATGATGCAGAGGAAAGGCAGTACCGAAGCCCAAATGTGATGAAGTGGCTTGATGATCTTAAAGAGGCTTTATATGAGGCAGAGTTGCTGTTAGATGAAGTTGCTACCGAAGCATCGCGAAATCCTGCTACCAGCAAGGTGCTAGGCTTCTTCACGGCTTTTATTAATCCATTTGACAAAGAAATTGCGGCTAGGGTTAAAGAAGTATTAGAGAACATAAAATTGTTGGCAGAGAAAAAGGATACGCTAGGATTGAGGAAGGGAATTTGTGCTGGCAATGAAGTTGGAGCCGGTTGGAAACTCTCCAGCAGATTGCCAACTGCATCCTTGTTGGATGAATCTAGCATATGTGGTAGAGAGGGTGATAAAGAGCAAATAATCAAAATTTTAGTTTCAGACAATGTCACATGCAATCAAGTGCCAATTATTAGTATAGTGGGCATGGGAGGGATGGGTAAGACCACCCTTGCTCAGCTTGTGTATAATGACCAAAGGATACTGGACCAATTTGACCTTAAAGCTTGGGTCTATGTTTCACAAGATTTTGATGTTGTTGTTGTCACAAAAGCAATTCTTAAGGCACTTCAGTCCTTATCAGAGGAAGAAAGTGACTTGAATTTGCTTCAACTTGAACTGAAGCAGAGATTGATGGGGAAGAAATTTTTGCTTGTTTTAGATGATGTTTGGAACGAAAGCTACTCGAGTTGGGACGCACTACAAATCCCCTTCATTTTTGGATCTTCAGGAAGTCGGGTTCTTGTTACTACACGTACTAAGAATGTAGCAACAGTCATGAACTCCTGTGAATTACTTCATTTAAAGCCATTGGAGAATATGTATTGTTGGAAGCTGTTTGTGAATCTTGCATTTCCTGACAAGGATACCAACAAATATCCAAATCTTGAATCAGTTGGCAGTAAAATTGTTGAGAAGTGTGGAGGATTGCCTTTAGCTATAAAAACATTGGGAAATATCTTGCGAGCAAAATTCTCCCATCATGAATGGGTTAAGATATTGGAAAGTGATATGTGGCACTTATCAGAGGATGATAGCAAAATTAACCCTGCTTTGAGATTGAGTTACCACAATCTTCCTTCCTATCTGAAGCGCTGTTTTGCTTATTGCTCCATATTTCCCAAAGGTTATGAGTTTGATAGCGACCAGTTAATCAAGTTGTGGATGGCAGAAGGTTTGTTGAGTTGCTTCCAAATAAATAAGAATGAAGAAGAGTTAGGTAGTGATTTCTTTAATGATCTACTGGCAAGGTCATTTTTCCAACAATCAATATGCCGTGGTTCTCACTTCACTATGCATGATCTTCTTAATGATTTAGCAAAATCTGTGTCAGGAGATTTTTGTTTACAAATGGAGCGTAGTTTGGTGCAACATATACCTAGGAGAACGCGCCATATTTCATGCTCTCACAAATTTAGCCTTGACAAATTTTTGGATCATATTTGCAAGTGTAATAGATTGCGTTGTCTTGTGGCACTCACATGGGAATTTGGCAGGGGAGATTTGATGAACAGCAATGCACAACGTGTTTTGTTTTCTAGAATAAAATATTTGCGTGTGTTATCCTTCAACAATTGTCTTCTCATAGAGTTAGTTGATGAGATAAGCAATTTAAAGCTTTTGCGTTATCTAGACCTTTCGTACACCAAGATTAAAAGGTTGCCTGACTCCATTTGTATGCTGCATAATTTGCAGACACTAATACTAATAGGGTGCTATCATTTGACAGAGCTCCCCGTAGAATTTCACAAACTTGTCAATTTGCGCCATCTTGATGTGCGTATGAGTGGAATAAATAAAATGCCGAAGCACATAGGAAGGCTGAAAAATCTTAAGACCTTGACTTGTTTTTACATCAGCAAGCATAGTGGGCTTGATATTAAGGAGTTGGGAAATCTCAACCAACTCCAAGGAACACTCTCAATTTTTAAGTTAGAAAATGTCAGTGATCCTGCCGATGCTACGGTGGCTAATATGAATGATAAAAAGAATTTAGAAGAATTGGTGTTGAATTGGGGTGACAAATATGGTAGGTCCTATCAAAATGATGACTCGATAATTGAAAGACATGTCTTGGATGCTCTTCAACCGAATGGGAACTTGAGAAGGCTTACTGTTTTACATTATGATGGAACTAGCTTTCCAAGTTGGTTTGGAGGTTCTCATTTTCCCAATTTAATATCCATTTCGCTGACTGAAAGTAAATTTTGTTTTATGTTGCCACCATTTGGTCAGCTCCCCTTTTTGAAGGAGCTGTCCATATCATGCTTTTATGGGATAGAGATCATTGGTCCTGAGTTTTGTGGTGATGATTCCTCAAGTGTTCCATTCAGATCACTTGAAATTTTGAAATTCGAGGAAATGAGTGCATGGAAAGAATGGTTCAGTTTTGATGGTCATGTAGAAGGTTTGTCTAGTCTCAAAGAGCTTTCTATAATGCGCTGTCCATGGTTGAGAAAGGCTCTGCCTCAACACCTTCCTTCTTTGGAAAAATTGGTAATTTGTGAATGCCAACACTTAGAGGATTCAGTTCCCAAGGCTGCTAACATTCATGAGCTAGAGTTGCGTAGCTGTGAAAATATATTGCTGAAAGATTTACCATCCAGCTTGAGCAAGGCCACGATTCTTGGAACTCGTGTCATTGAGTCCTGCCTCGAGCAAATTCTGCTCAACAATTCCTTTCTTGAAGAGTTAGGAATACATGACTTTCAAGCTCCGAATCTAAACTGGTCCTCTTCGAATTTGCATATACAAGATTCTCTTGGAACTGTATCTATAACAAGCTGGTACTCCTCTTCGTTGCCATTTGCACTAGACATGTTTGCCAATCTTCGTTCTCTACATTTCTATGATTGTCCACAGCTTGAGTCGTTTCCTGAGGGGGGTTTGCCTTCAAACCTGCGCAAACTCGAAATTGAGGGTTGCCCCAAACTGGTTGCATCTAGGGAGGAGTGGGGATTGTTCGAACTTCATTCTTTGAAAGAGTTGAGGGTTAGTGATGACTTTGAAAACGTGGAGTCTTTTCCAGAGGAGGGGTTGCTGCCATCCAGTCTCAGTGATCTATACTTAATTGGATGTTCAAAGCTAACAACAACAAACTCTTCGGGTTTTCTCCACCTCAAATCTCTCAAATCCTTCTATATTCTAACATGCCCTCGTCTTGAGTGCTTGCCAGAAGAAGGCTTAACAAACACTCGTTCTGTTCTGTTCATTCTTAGTTGCCCTTTACTAGAGCAGCGGTACCAAAAGGATGGAGAGCATTGGCATAAAATTCACCATATCCCTTCTGTGATGATTAATTGA 3483 0.4011 MAAEVTGGAFLSASLQVTFDKLASREIKDYFQGRKLKDETLKKLDFALNSINQVLDDAEERQYRSPNVMKWLDDLKEALYEAELLLDEVATEASRNPATSKVLGFFTAFINPFDKEIAARVKEVLENIKLLAEKKDTLGLRKGICAGNEVGAGWKLSSRLPTASLLDESSICGREGDKEQIIKILVSDNVTCNQVPIISIVGMGGMGKTTLAQLVYNDQRILDQFDLKAWVYVSQDFDVVVVTKAILKALQSLSEEESDLNLLQLELKQRLMGKKFLLVLDDVWNESYSSWDALQIPFIFGSSGSRVLVTTRTKNVATVMNSCELLHLKPLENMYCWKLFVNLAFPDKDTNKYPNLESVGSKIVEKCGGLPLAIKTLGNILRAKFSHHEWVKILESDMWHLSEDDSKINPALRLSYHNLPSYLKRCFAYCSIFPKGYEFDSDQLIKLWMAEGLLSCFQINKNEEELGSDFFNDLLARSFFQQSICRGSHFTMHDLLNDLAKSVSGDFCLQMERSLVQHIPRRTRHISCSHKFSLDKFLDHICKCNRLRCLVALTWEFGRGDLMNSNAQRVLFSRIKYLRVLSFNNCLLIELVDEISNLKLLRYLDLSYTKIKRLPDSICMLHNLQTLILIGCYHLTELPVEFHKLVNLRHLDVRMSGINKMPKHIGRLKNLKTLTCFYISKHSGLDIKELGNLNQLQGTLSIFKLENVSDPADATVANMNDKKNLEELVLNWGDKYGRSYQNDDSIIERHVLDALQPNGNLRRLTVLHYDGTSFPSWFGGSHFPNLISISLTESKFCFMLPPFGQLPFLKELSISCFYGIEIIGPEFCGDDSSSVPFRSLEILKFEEMSAWKEWFSFDGHVEGLSSLKELSIMRCPWLRKALPQHLPSLEKLVICECQHLEDSVPKAANIHELELRSCENILLKDLPSSLSKATILGTRVIESCLEQILLNNSFLEELGIHDFQAPNLNWSSSNLHIQDSLGTVSITSWYSSSLPFALDMFANLRSLHFYDCPQLESFPEGGLPSNLRKLEIEGCPKLVASREEWGLFELHSLKELRVSDDFENVESFPEEGLLPSSLSDLYLIGCSKLTTTNSSGFLHLKSLKSFYILTCPRLECLPEEGLTNTRSVLFILSCPLLEQRYQKDGEHWHKIHHIPSVMIN 1160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01739 1160 Gene3D Ribonuclease Inhibitor 561 943 IPR032675 -
Cca10g01739 1160 Gene3D - 155 326 IPR027417 -
Cca10g01739 1160 Coils Coil 41 61 - -
Cca10g01739 1160 PRINTS Disease resistance protein signature 197 212 - -
Cca10g01739 1160 PRINTS Disease resistance protein signature 270 284 - -
Cca10g01739 1160 PRINTS Disease resistance protein signature 367 381 - -
Cca10g01739 1160 PRINTS Disease resistance protein signature 596 612 - -
Cca10g01739 1160 Gene3D Ribonuclease Inhibitor 944 1138 IPR032675 -
Cca10g01739 1160 Coils Coil 72 92 - -
Cca10g01739 1160 SUPERFAMILY L domain-like 491 927 - -
Cca10g01739 1160 Pfam NB-ARC domain 175 416 IPR002182 GO:0043531
Cca10g01739 1160 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 430 IPR027417 -
Cca10g01739 1160 Pfam Rx N-terminal domain 10 100 IPR041118 -
Cca10g01739 1160 Gene3D - 15 122 - -
Cca10g01739 1160 PANTHER OS05G0414200 PROTEIN 15 880 - -
Cca10g01739 1160 SUPERFAMILY RNI-like 854 1144 - -
Cca10g01739 1160 Gene3D - 410 503 IPR036388 -
Cca10g01739 1160 PANTHER DISEASE RESISTANCE PROTEIN RP 15 880 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01739 Cca-Chr10 31910405 31913887 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01739 578 717 WRKY Transcription Factor Family AT4G12020 31.915 1.02e-07 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01739 - - gmx:100777510 1850.48