Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01730 ATACCAAAGGGAGCTTTCTCCAAAAAGAAAATGCAGAAGTTGCAGCAGAAGAAGATCACCAACCTGTTGTCTGGTTTCATGAAGAAATGAGTATGGGAAGTTACTGCAGTGATGGGGAACAAGACATGGATGATTCTGATTTCAAAACCTATGATATGGAGTGGGAGGAGGAGCGATTGTGCGGATTTGATCATGAAGAGGATGCTGATTCTTCTGTGTACACAGAAGACTCAAAAGTTGAGTCCTCATCAGAGATTTCTCATGATGTGTCCGTGACATGGTTAGATGATATCCTTGGTGGCTATTATGAGAACTTTCAGGTTGATGAAACACAAAAACAAGTCAATTCAGAAGAAAGCACCTACTTTGAAGAACAACGTAATCGCATTAGTTATGTTCTTGAGGACGCAAGTGGAAGCACCGAAACTCAAGAAATTGAATACTCCTCCACAGAAATGGGTTGTGACCAATCTTCTTTTACAGAGGAAATATTTAAGTACCTTACAAATGCACAAGATTATGGTGGAGAAAATAAAGAACTTGTGGATGATGAGGCCAGTTGCAACATGAAGGCACTTGATGAAGAGAAAGAGACAATTGACAATTCTCAATGTCAGAAGATGAGTGAAACATGCAAAATTGATGAGGCCAGTGAAGATGGAAACTCAAGCAGCCTAGAGAACATTGATGAGAGCAACAAAGGGGAGAGGCAAATTGAGTTGGTTGAAGAAAAAGACCAAGTCAAAGCTAAAAGGTTCCAAAGCACAAGTGACAAAGGTGGTGAAGAAGAAAGCACAAGCAAGAATTGGAGAGGTGCAATTAGGAGAAAAAGGGGTGTTGAAGATGATGATGAAATGAGAAAGTTCAACCCAAAAGAACCAAATTTTCTGCCCTTGGCTCCTGAGCCAGAACAAGAAAAGGTTGACCTGAGGCATCAAATGGTGGATGAGAGAAAGAATGCCGAGGATTGGATGCTTGATTGTGCACTCAGACAAGCTGTCACCAAACTTGCCCCAGCTAGGAAGAAGAAGGTGGCACTGCTTGTTGAAGCCTTTGAAACGGACGAATTCAAGCTTGTAGCTGATGAATGCTGCTTAGATCAACCAAGTCAAAGTATTGCTTGCACTCAAAGCATAACCAAACCTCCGAGGAGTAATGTGCATGGCCATTGCAACAAAGTGAAGCTCAAGAGAGGAAATTTATGGTTACTATTTAGTTACATAGGTGTAGAAGCCGACCTTCCAACACTAGCAGTTCCTCTACTTGTAGAAGACCCAACATGCTTCCACTTCGTCCAGCTTTACTCCCATGAAACTTTTGCAGGTGCGGAGTATGACTCACTCTTGCTTTGA 1352 0.4194 TKGSFLQKENAEVAAEEDHQPVVWFHEEMSMGSYCSDGEQDMDDSDFKTYDMEWEEERLCGFDHEEDADSSVYTEDSKVESSSEISHDVSVTWLDDILGGYYENFQVDETQKQVNSEESTYFEEQRNRISYVLEDASGSTETQEIEYSSTEMGCDQSSFTEEIFKYLTNAQDYGGENKELVDDEASCNMKALDEEKETIDNSQCQKMSETCKIDEASEDGNSSSLENIDESNKGERQIELVEEKDQVKAKRFQSTSDKGGEEESTSKNWRGAIRRKRGVEDDDEMRKFNPKEPNFLPLAPEPEQEKVDLRHQMVDERKNAEDWMLDCALRQAVTKLAPARKKKVALLVEAFETDEFKLVADECCLDQPSQSIACTQSITKPPRSNVHGHCNKVKLKRGNLWLLFSYIGVEADLPTLAVPLLVEDPTCFHFVQLYSHETFAGAEYDSLLL 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01730 449 Pfam Plant calmodulin-binding domain 251 353 IPR012417 GO:0005516
Cca10g01730 449 SMART CaM_binding_2 243 360 IPR012417 GO:0005516
Cca10g01730 449 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 1 353 IPR044681 GO:0005516
Cca10g01730 449 MobiDBLite consensus disorder prediction 210 299 - -
Cca10g01730 449 MobiDBLite consensus disorder prediction 229 290 - -
Cca10g01730 449 PANTHER PLANT CALMODULIN-BINDING-LIKE PROTEIN 1 353 - -
Cca10g01730 449 MobiDBLite consensus disorder prediction 63 85 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01730 141 353 Calmodulin-binding Proteins AT2G38800 37.555 1.11e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01730 - - gmx:102660315 498.819