Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01728 ATGAGCACGGGGACTCAAAATATGAAAATAGTAGACTCAGGGATCCAAAATATTGAGAGTTATGAGCGAGAGGACTCGAAATGTAGAAAAATGGTGGACTCGGTGATCCAAAATATTGAGAGTTATGAGCGCGGGGACTTGAAATGTAGAAAAATAGTGGACTCGGGATCCAAAATATTGAGAATTATGAGCTCGGGGACTCCAAACATTAGCACGAGGGCTAAAAACATTCAAACGAGAGTGAGCGCGAGGGCTCGAAACATTAAGGAACATGATCGCAAGGCTCGAAAAATTGACATGAGTGCTGCTTGTGTTTGCTCTTTGTCCTCTCCAACTTGTTCATCCTCTGGCTCCTCCTCCGCACGTGTGTCTTCTTCTTATCTTGAGCTCTGGCACGCTTGTACTGGCCCCCTCACTTCCCTCCCAAAGAAAGGGAATGTGGTGGTGTATTTCCTTCAAGGGCACTTAGAACAAGCTGCATCCTTCTCTCCCTTTTCACCAATGGAGATGCCTACCTATGATCTTCAGCCACAGATCTTTTGTAGAGTTGTCAATATTCAGATACTTGCCAATAAGGAGAATGATGAGGTTTATACACAGGTTACTTTGCTTCCCCAGGCTGAGGAAGCCTTGAAAGGAGATAAAGATGGAGCTCAAAATCTAACAAGCATGGAGCCTAAAAAGTTGTGGTCATAA 696 0.444 MSTGTQNMKIVDSGIQNIESYEREDSKCRKMVDSVIQNIESYERGDLKCRKIVDSGSKILRIMSSGTPNISTRAKNIQTRVSARARNIKEHDRKARKIDMSAACVCSLSSPTCSSSGSSSARVSSSYLELWHACTGPLTSLPKKGNVVVYFLQGHLEQAASFSPFSPMEMPTYDLQPQIFCRVVNIQILANKENDEVYTQVTLLPQAEEALKGDKDGAQNLTSMEPKKLWS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01728 231 PANTHER AUXIN RESPONSE FACTOR 104 215 - -
Cca10g01728 231 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 104 215 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01728 Cca-Chr10 31624596 31629884 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01728 124 211 B3 DNA Binding Superfamily AT5G60450 71.591 3.62e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01728 - - gsj:114379877 176.407