Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01723 ATGTTTAAAAATGTTCCTAAAGGTGATGCTATATTATTGAAGGTTGTATTGCCCAATTGGTCGGATGAAGAATGTATTAAAATTTTAAGTAATTGCTACGAAGCTTTGCCACAAAATGGGAATGTGATCGTCGTGGAGTATATAGTTCCTGAAGAAATTCACTCCACCGATGTAGATAAAATGGTAATTGGCTTAGACAACATGATGCTTCTGAATGATGGAAGCGAAAGAACGGAGAAACAATTTGAGAATTTATGCAAACACTCAGGATTTTCTCATTTTCATGTAGCTACTCGTGTCTTCTCTACTCTGTTAGTGATTGAATTTCGTAAGTGA 336 0.3542 MFKNVPKGDAILLKVVLPNWSDEECIKILSNCYEALPQNGNVIVVEYIVPEEIHSTDVDKMVIGLDNMMLLNDGSERTEKQFENLCKHSGFSHFHVATRVFSTLLVIEFRK 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01723 111 Pfam O-methyltransferase domain 1 92 IPR001077 GO:0008171
Cca10g01723 111 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 111 IPR016461 GO:0008168
Cca10g01723 111 PANTHER O-METHYLTRANSFERASE 1 111 IPR016461 GO:0008168
Cca10g01723 111 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 111 - -
Cca10g01723 111 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 103 IPR029063 -
Cca10g01723 111 Gene3D Vaccinia Virus protein VP39 2 99 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01723 Cca-Chr10 31452449 31452917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01723 1 111 Monolignol Biosynthesis Gene Families AT5G54160 46.903 2.83e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01723 - - ccaj:109817813 200.29