Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01700 ATGCCGAAAGAAAACATGGATGATGGAAATGCTGAGGTTTCTGATAAGCTTTCTGATAATATTCTATTATTGAATCCAGAGTCATCCAGCAGTTTTCGGGCTTCAACATCTTTGAACACAGTTACTGAACTGTGTAGGAGTAGCAGCAGAACATGCACCCACACTCACACATGCAACCCACCTGGCCCAGATGCTGCTcacacacacacatgctatcacacacacacccaAGTTTTTGCACCTGAAGATGATGACAGGGAGGACACAAACTTCAAGCAGAAAAAGCCTTCCGGCAACCGAGAAGCTGTTAGGAAGTATAGGGAGAAGAAGAAGGCACACACAGCTTATTTGGAGGAGGAAGTTAAGAAATTGCGTCTGGTGAATCAGCAACTAGTGAGGAAGCTACAAGGGCAGGCACTTCTTGAGGCAGAATTAGCAAGGTTGAGGAGCATTTTGACACACCTTAAGGGGAAAATAGACAGTGAATTGGGTGATTTCCCCTTTCAAAATCAGTGTAACTCTTCTTACATTTTTAAAGAAGGGGATGCTGGTTTGATGTCCTCTGCCAGGACTATTGGTCTTCAGTGTCAGAACGATTTGCCGTGCTTCCATCCACATGCAGGATCATCATCCCAAGTCAACATTTGTGCCTATGGAAAATCCATGATTCCATGGGAAGGAAACTGTCAACCAGAAACTGTAGATTGTCAAACTGATGCAAATAACATGACCAATACTGAAGGACAAACTGTGGAGACAGTGGATAACTTCATGTCATCTACATCTCAAGATGGATAG 798 0.4173 MPKENMDDGNAEVSDKLSDNILLLNPESSSSFRASTSLNTVTELCRSSSRTCTHTHTCNPPGPDAAHTHTCYHTHTQVFAPEDDDREDTNFKQKKPSGNREAVRKYREKKKAHTAYLEEEVKKLRLVNQQLVRKLQGQALLEAELARLRSILTHLKGKIDSELGDFPFQNQCNSSYIFKEGDAGLMSSARTIGLQCQNDLPCFHPHAGSSSQVNICAYGKSMIPWEGNCQPETVDCQTDANNMTNTEGQTVETVDNFMSSTSQDG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01700 265 MobiDBLite consensus disorder prediction 81 105 - -
Cca10g01700 265 Pfam Basic region leucine zipper 92 144 IPR004827 GO:0003700|GO:0006355
Cca10g01700 265 SUPERFAMILY Leucine zipper domain 92 136 IPR046347 GO:0003700|GO:0006355
Cca10g01700 265 SMART brlzneu 87 154 IPR004827 GO:0003700|GO:0006355
Cca10g01700 265 CDD bZIP 92 146 - -
Cca10g01700 265 Gene3D - 80 156 - -
Cca10g01700 265 PANTHER BASIC LEUCINE ZIPPER 23 6 244 - -
Cca10g01700 265 PANTHER CCAAT/ENHANCER BINDING PROTEIN 6 244 - -
Cca10g01700 265 MobiDBLite consensus disorder prediction 81 107 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01700 49 188 bZIP Transcription Factor Family AT3G51960 54.483 7.54e-50 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca10g01700 bZIP_2 5.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01700 K25785 - gmx:100527780 380.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01700 10 30581330 30583572 Cca10g01700 10 30581330 30583572 ECH