Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01687 ATGTTGCGAACAACAATGACAGCTGTAAATGCTGGTAAAAAATTCTGGGGTTGTCCAAATTACAAGTTTGGTGATGCTGAAGAACAAGGATGCAACTTTTTCAAGTGGTCTTTAGAGGAATATGTGGATGAAAGGGATTTGTTGATTGCTAGGCAAAGGAGAAAGATGAACAATCTCCAGAGTTCTCTGAAGTCAATAAGATGGTGGATGAAGAAACAAAAGGAAGAGAAGGCTGCATTAGATGCAAAATGCAAAAAGGTTAGCAGCCATATAAATGATAATGCCAAGAAGCGAATGGAACTTATGGAGGAGGAGAACAAATTGGATGTGGAATTACGGGGTAAGTACACAGAAATGGAAGAGTTGAGGAGGCAGGAAGAAACTCAACAACAAAAACTTGTAAAAGCTAGGGAGGAACTTGCTATTGCTGAACTTGAACTTGAGGAGATGGTCCCTTATGTAGCTCCTAAGGATGAGCTTGGATTGATTTCTGACACACACATATTGAGGCACAAGTTGGCACTTGAGTTTAAGATCCTCACAGATAGGGATGCTCTCTTGAGTCAATTTTGGaaagtgctgtaa 585 0.3949 MLRTTMTAVNAGKKFWGCPNYKFGDAEEQGCNFFKWSLEEYVDERDLLIARQRRKMNNLQSSLKSIRWWMKKQKEEKAALDAKCKKVSSHINDNAKKRMELMEEENKLDVELRGKYTEMEELRRQEETQQQKLVKAREELAIAELELEEMVPYVAPKDELGLISDTHILRHKLALEFKILTDRDALLSQFWKVL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01687 194 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 51 161 IPR027131 GO:0000724|GO:0005524|GO:0006281|GO:0016887|GO:0030915
Cca10g01687 194 Coils Coil 119 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01687 Cca-Chr10 30215017 30223996 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01687 54 189 Structural Maintenance of Chromosomes family AT5G15920 36.496 8.27e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01687 K22803 - ccaj:114915856 288.5