Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01666 ATGCCTTTCAACTTGGCGGTGGTGGGTACGCAGACAACACTGTGTGGAGACAAGTTAGGTAACCTCATTTTGGAAGTAGCTAAAAACTTTGTTATATATTTGGGGATGGTGATTGCGTGCAATGGTTTACGTTTTCTTCTAAAGCCTTATAAACTTCCTCGCATTACTTCAGACATAATGGTAGGACTAACTGTGGGAAACATAGGAATTGTGCGAAGGCTGTTTCAGAAATTCAACCTGACATTTGGGTTCATCATAGATTTTGGAATGATGTGTTACATGTTTGCATTGGGGATAGAGATGGATCCACGAGTGCTCCTTGCAAGACCAGCTAAGTACACAAAAGTTGCTGTTTCAGGAGTTATATGCACGTTCATCGTTGCAGGTCTTATGGCTCCAATGCTCCAATTCTTCCCTGGTGAACACAGGGTTCTGGGTTTTACCCTCTCCCTCGCCACCATGCTCACTAACACAGACTCACCTGTGCTCACTCGTTTGATGACTCAGCTCAAGATAGGAAAGTCTGATATTGGCAAGCTTATGATTGGAGCAGCAGTGCACTCAGATTTTCTTTGCTACTTGATCCTTTCAATTGGGTACATAATCCTGCCATTGCCACAATATTGTAACCAATTTCAAGAAATGATGGATTTTAAGCCTAAACCTAGGGAGAGCATCAAAATGGGGTGTGCAGTTTTGGTGCAAGTAGTGTTCACTTCTATGGTCTCTCCAATGCTTATGAAGTGGGTTAGCAATGAGAACCCTGAGGGTAGGCCCATGAAGGGTCCACACTTGGTGCTCTCACTAGCCTTCATGGTGTTAATGTGTGCCTTCACCACTTTGTATGATTATAGCCCTATGTTGAGTGCTTTTCTTGTAGGCCTTTGTGTTCCAAGGGAGGGTAGAGTTTCCAAATGGGTTATCACAAGAATCAACTACATGTTGACCTCTATTTTCTTTCCCATCTTTTTCTTGTGGATGGGGTATGAGGCCAATTTCAGGATGTTTGATGTACGTCATCCTTTGACATGGGTCAGATTTGTTTCGCTCTTGATAGTGGCAACAGCTGGAAAAGTTGCTGGAACAATTATCGCTGGGGCCATGCTGGGATTTCGCTGGCCTGAATCAGTTGCAATAGGATTGCTTCTTGTCACTAAGGGCCATTTGCATATCTACTTGGCTATCAAAGTGATAGGTTGTGGTGCTGCAAGTGTTTCCACAGGCATTGTGATGGTAATGGCAACCTTTTTAACAGCTTTGCCTGCCCCAGCAATTGTGGCAAACATCATTAGAAGAGCAAAGAAAAGAGCACCTACACATCGTTTGGCTATTCAATTGCTTGACCCTTCAAGTGAGATGAGGATCCTCCTGTGTGTTCAAGGGCCTCAGAATGTTCCTGCCTCCATCAACTTGGTTGAGATCACGAGAGGAACCGCTGACGCCGGCATTGTGGTGTATGTCACTGACATGATTGAACTCACTGATGAACTATCAGACTCATTGGAGAGGGACGAAGGATTGCACGCAACCACATTGAAAGACAAGGAAGTCATGGACATGAGAGAACAAGTTACCAAGTCATTCCAAGACTATGTGATGGAGAATGATGATGGCATTACACTCAAAAGAACAATGGCACTCTCAACAATCACTACCATGCCAGCAGACATTTGCATTTTGGCAGAGGACTTGATGATTGCCCTTGTCATATTGCCATTCCACAGGAGCCAGCGTGAGGATGGAAAGTTTGATGCTGGTAATTCAGGCTTCAGATACGTGAACAGAAAGGTACTAAGAAGTGCCCCTTGTTCTGTTGGGATTCTAGTAGACAGAGGCTTTGGATCACTTGAACAGATATCAAAATGTGAAGTAGAACTTAATGTGGCAGTCATATTCATTGGTGGAAAAGATGATAGGGAAGCACTTGCCTATGCTAGCCGTGTGGCGCAGCATCCAAAAGTTAAGCTCACAGTACTAAGATTCCTGGTAGATACCAGCATAGAATCCTCAACGTTGTACAGGATCATCCTTCCAGAGCAGGAGAATGAGATGAAGTCGGATGATGAATGCTTTACACAGTTCTATGAGAGGCATGTGTTAGGAGGTAGGATTTCCTACATGGAGAAGCATCTTGCAAATGCTTCTGAGACCTTCTCCACTCTCAAATCATTTGAAGGGCAATACTCATTGGTGATTGTTGGAAGAGAAGGAGGAATGAACTCTATTTTGACACTGGGCATGAATGATTGGCAACAGTGCCCGGAATTGGGACCAATAGGGGATGTTCTTTCAGGATCAGACTTCTCAGCCACTATTTCTGTTTTGATCATCCAACAACATAGGCTTAAAGGAGAAATAGATGGGTTGGATGAAGACTTTTCTATAATATGA 2391 0.4375 MPFNLAVVGTQTTLCGDKLGNLILEVAKNFVIYLGMVIACNGLRFLLKPYKLPRITSDIMVGLTVGNIGIVRRLFQKFNLTFGFIIDFGMMCYMFALGIEMDPRVLLARPAKYTKVAVSGVICTFIVAGLMAPMLQFFPGEHRVLGFTLSLATMLTNTDSPVLTRLMTQLKIGKSDIGKLMIGAAVHSDFLCYLILSIGYIILPLPQYCNQFQEMMDFKPKPRESIKMGCAVLVQVVFTSMVSPMLMKWVSNENPEGRPMKGPHLVLSLAFMVLMCAFTTLYDYSPMLSAFLVGLCVPREGRVSKWVITRINYMLTSIFFPIFFLWMGYEANFRMFDVRHPLTWVRFVSLLIVATAGKVAGTIIAGAMLGFRWPESVAIGLLLVTKGHLHIYLAIKVIGCGAASVSTGIVMVMATFLTALPAPAIVANIIRRAKKRAPTHRLAIQLLDPSSEMRILLCVQGPQNVPASINLVEITRGTADAGIVVYVTDMIELTDELSDSLERDEGLHATTLKDKEVMDMREQVTKSFQDYVMENDDGITLKRTMALSTITTMPADICILAEDLMIALVILPFHRSQREDGKFDAGNSGFRYVNRKVLRSAPCSVGILVDRGFGSLEQISKCEVELNVAVIFIGGKDDREALAYASRVAQHPKVKLTVLRFLVDTSIESSTLYRIILPEQENEMKSDDECFTQFYERHVLGGRISYMEKHLANASETFSTLKSFEGQYSLVIVGREGGMNSILTLGMNDWQQCPELGPIGDVLSGSDFSATISVLIIQQHRLKGEIDGLDEDFSII 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01666 796 PANTHER CATION/H+ EXCHANGER 3 14 793 - -
Cca10g01666 796 PANTHER CATION/H + ANTIPORTER 14 793 - -
Cca10g01666 796 Pfam Sodium/hydrogen exchanger family 32 420 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca10g01666 796 Gene3D - 28 439 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01666 Cca-Chr10 29498846 29503915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01666 10 796 Antiporter Super Family AT3G52080 46.716 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01666 - - gmx:100786469 1289.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g01666 10 29498846 29503915 Cca10g01666 10 29498846 29503915 ECH