Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g01643 ATGAAAAGGCTGGAATTACAAATATTTATTCCTCTCGAACTGGGTGAAGTTTATCTGTTCTATGCAGAATTGGCTTCATGTGAAACTTTCAGATCAGGAATCCCCCATGTGGAATTTGCGTTTCGGAGCTTTAAAAATCTTGAGCTGAGTTGTGGCAGTTTCCGGCTCGTTGGATTGGAGAATGTTTTGGAGTTTGCATTTGGAGAGGGGCTTGGAAACGGTAGTGTCGTTGGGGGCGCGGAGGAGAGGGTTTGTTTTGTCGTTTCAGATGAAACGAGCACGGAGGACAACATTGCGGAGGGAGAGGAGGTTGCGGAGGAGGGGAGCGTGGATGGCGTTGCGCGGAGGGAAGGTGCCGGTGGCGTGGGCACAGGAGCGTTGGTAGGCGAAGATCCAGAGCACAAGCATTGGTACGAATCTTCCCTAGCGGACAAAGCCTCCATAATCCACACCTACCAAATAGTCTTTCACGGATTCTCAGCAAGTCTCTCCCATGCTGAGGCACCCAAGCTGCAATCACTCTCCCACGTCATAACTCTCATACCTGAGCAGCTGTGCCACCTCCACACCACGTGCTCCCCTCACTTCCTCGGCCTCAACATCACCGACATCGCCAGCTTACTCAAGGAGACTGACTTGGCTTCGATATCGTCATCAGAGTCATCGACACCGTCATGCAACCGCAAGCTCATCGGAGCCTGCTACTTCTACGCCGACTACGAAGCCACCAACAACAAAATGAACAGCACCCTTGAGTATTGCTCCCCCAGAGACTCCGACGGCCATGACACCCACACCGCCTCCATCACCGTCAGAAGATACGTCTTCCCAACCTCCATCATGGGCTATGCCAAAGGAATGGCTGCTTGGATGGCTCCCAAGGCTCGCCTCACCGTCTATAAGTTGGATACAAACCGCGACCCTAGTAGTCACTGCACCAACAATTGCACTCCCTGGCGAGAGCGACACACAGAGAGAAGAGGGTTTGTGTTCCGATTGAATGGCGAGATATTTTGA 1017 0.5231 MKRLELQIFIPLELGEVYLFYAELASCETFRSGIPHVEFAFRSFKNLELSCGSFRLVGLENVLEFAFGEGLGNGSVVGGAEERVCFVVSDETSTEDNIAEGEEVAEEGSVDGVARREGAGGVGTGALVGEDPEHKHWYESSLADKASIIHTYQIVFHGFSASLSHAEAPKLQSLSHVITLIPEQLCHLHTTCSPHFLGLNITDIASLLKETDLASISSSESSTPSCNRKLIGACYFYADYEATNNKMNSTLEYCSPRDSDGHDTHTASITVRRYVFPTSIMGYAKGMAAWMAPKARLTVYKLDTNRDPSSHCTNNCTPWRERHTERRGFVFRLNGEIF 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g01643 338 Gene3D Peptidase S8/S53 domain 221 305 IPR036852 GO:0004252|GO:0006508
Cca10g01643 338 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 124 189 IPR037045 -
Cca10g01643 338 SUPERFAMILY Subtilisin-like 223 304 IPR036852 GO:0004252|GO:0006508
Cca10g01643 338 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 222 302 IPR045051 -
Cca10g01643 338 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 132 206 IPR045051 -
Cca10g01643 338 PANTHER SERINE PROTEASE, PUTATIVE, EXPRESSED-RELATED 222 302 - -
Cca10g01643 338 PANTHER SERINE PROTEASE, PUTATIVE, EXPRESSED-RELATED 132 206 - -
Cca10g01643 338 Pfam Peptidase inhibitor I9 132 189 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g01643 Cca-Chr10 28537980 28548677 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g01643 132 302 Subtilisin-like Serine Gene Family AT3G14240 50.718 2.37e-53 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g01643 - - gmx:100813247 219.935